Evidence map›Paper›PMID 41203725›Full record

ArticleScientific reports2025

A fixation-compatible protocol for intracellular and surface marker-based detection of circulating tumor cells in hepatocellular carcinoma.

Boqun Zhu, Kanako Yoshida, Harry Luu, Hao Zhang, Joseph V Passero, Kathy Liu, Selena Y Lin, Ying-Hsiu Su, Hyunsoo Song, James P Hamilton and 3 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

13 authors.

Boqun Zhu *Department of Gastroenterology and Hepatology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Kanako Yoshida *Department of Hepatology, Graduate School of Medicine, Osaka Metropolitan University, Osaka, Japan.
Harry LuuDepartment of Gastroenterology and Hepatology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Hao ZhangDepartment of Molecular Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
Joseph V PasseroDepartment of Gastroenterology and Hepatology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Kathy LiuDepartment of Gastroenterology and Hepatology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Selena Y LinJBS Science, Inc, Doylestown, PA, USA.
Ying-Hsiu SuBaruch S. Blumberg Institute, Doylestown, PA, USA.
Hyunsoo SongDepartment of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
James P HamiltonDepartment of Gastroenterology and Hepatology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Qingfeng ZhuDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Robert A AndersDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Amy K KimDepartment of Gastroenterology and Hepatology, Johns Hopkins University School of Medicine, Baltimore, MD, USA. amy.kim@jhmi.edu.

Funding

Impact of preanalytic procurement and processing variables on the detection of HCC DNA in urineU01CA275648 · NCI · BARUCH S. BLUMBERG INSTITUTE · PI Ying-Hsiu Su · 2023 to 2026
$1.5M
Improved early prognostic algorithm for hepatocellulcar carcinomaK08CA237624 · NCI · JOHNS HOPKINS UNIVERSITY · PI KIM, AMY K · 2020 to 2024
$1.3M
Congressionally Directed Medical Research Programs W81XWH-20-1-0605NCI NIH HHS K08 CA237624NCI NIH HHS U01 CA275648NIH HHS K08CA237624-01A1NIH HHS U01CA275648
6 · The paper itself

Abstract

Circulating tumor cell (CTC) detection in hepatocellular carcinoma (HCC) is limited not only by the rarity of CTCs but also by a heavy reliance on cell surface markers such as EpCAM, which are variably expressed or lost during tumor progression. Detecting intracellular markers, such as cytokeratin offers an important complementary and comprehensive strategy but remains technically limited in flow cytometry due to the need for fixation and permeabilization, which often lead to cell loss and surface epitope damage. In this study, we systematically evaluated the feasibility of using fixed samples for flow cytometry, using HepG2 cells, PBMCs, and CTCs from patients with HCC. Our results demonstrate that fixation enabled intracellular staining without compromising cell surface marker detection, even after short-term storage at 4 °C and long-term storage at -80 °C. Fixed samples, particularly fixed unfrozen, exhibited comparable staining performance to fresh samples with only a 7-10% reduction in cell recovery. Clinical validation in HCC patients confirmed successful CTC detection, and tumor-specific CTNNB1 mutations were identified in CTC-derived DNA but not in matched plasma cfDNA. These findings support fixed CTC sample workflows as a reliable and practical approach for CTC analysis in HCC.

Indexed as

Biomarkers, TumorCarcinoma, HepatocellularLiver NeoplasmsNeoplastic Cells, CirculatingTissue Fixationbeta CateninEpithelial Cell Adhesion MoleculeFemaleFlow CytometryHep G2 CellsHumansMaleMutationbeta CateninBiomarkers, TumorCTNNB1 protein, humanEpithelial Cell Adhesion Molecule

Identifiers

PMID41203725
PMCPMC12594790

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.