Evidence map›Paper›PMID 41203720›Full record

ArticleScientific reports2025

Exploring the inhibition mechanisms of momordin Ic on S. aureus serine/threonine phosphatase (Stp1) using theoretical and experimental approaches.

Yanan Yang, Xuenan Li, Pingping Hou, Na Wei

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yanan YangFaculty of Food Science and Technology, Suzhou Polytechnic Institute of Agriculture, Suzhou, 215008, Jiangsu, China. 18844199768@163.com.
Xuenan LiCollege of Food Science and Engineering, Jilin Agricultural University, Changchun, 130118, Jilin, China.
Pingping HouSuzhou Xiangcheng Administration for Market Regulation, Suzhou, 215131, Jiangsu, China.
Na WeiDepartment of Inspection, Hanzhong People's Hospital, Hanzhong, 723000, Shaanxi, China.

Funding

Jiangsu double Innovation PhD project JSSCBS20221014the Doctoral Promotion Program Research Initiation Fund BS[2022]21
6 · The paper itself

Abstract

Serine/threonine phosphatase (Stp1) modulates the expression of Staphylococcus aureus (S. aureus) by regulating cysteine phosphorylation. Therefore, Stp1 is a promising target for inhibiting S. aureus infection. In this study, the natural compound momordin Ic was found to have significant inhibitory activity against Stp1 through virtual screening and phosphatase assays. Molecular dynamics simulations and enzyme kinetics experiment demonstrated that momordin Ic binds to the active center of Stp1, thereby reducing its affinity for the substrate. Radius of gyration, solvent-accessible surface area, and root mean square fluctuation analyses showed that drug-bound Stp1 was more stable than free protein. Moreover, Gly41, His42, Lys43, Thr102, Asn162, and Ile164 played crucial roles in the binding of Stp1 to momordin Ic. The binding sites were analyzed using phosphatase and fluorescence quenching experiments. This study demonstrates that momordin Ic is an effective Stp1 inhibitor and provides a foundation for the development of highly effective antitoxic drugs.

Indexed as

Bacterial ProteinsEnzyme InhibitorsPhosphoprotein PhosphatasesStaphylococcus aureusBinding SitesKineticsMolecular Docking SimulationMolecular Dynamics SimulationProtein BindingBacterial ProteinsEnzyme InhibitorsPhosphoprotein PhosphatasesInhibition mechanismMolecular dynamics simulationMomordin IcSer/Thr phosphatase (Stp1)Virtual screening

Identifiers

PMID41203720
PMCPMC12594824

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.