Evidence map›Paper›PMID 41199396›Full record

ArticleMicrobiome2025

Phyllosphere microbes in foxtail millet primarily affect quality by modulating coloration and bitter compounds.

Qi Liu, Dongbing Hu, Yuxin Qiao, Xiaoyu Zai, Xingyu Hao, Yuzheng Zong, Dongsheng Zhang, Xinrui Shi, Fusuo Zhang, Ping Li and 1 more

Abstract read
In one paragraph

Article in Microbiome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Qi LiuCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Dongbing HuCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Yuxin QiaoCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Xiaoyu ZaiCollege of Resources and Environmental Sciences, China Agricultural University, Beijing, 100193, China.
Xingyu HaoCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Yuzheng ZongCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Dongsheng ZhangCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Xinrui ShiCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Fusuo ZhangCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China.
Ping LiCollege of Agriculture, Shanxi Agricultural University, Taigu, 030801, China. lipinghxy@126.com.
Chunxu SongCollege of Resources and Environmental Sciences, China Agricultural University, Beijing, 100193, China. chunxu.song@cau.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCrop quality is influenced by crop-related factors such as varieties and metabolites, as well as by environmental conditions. Recent studies have shown the important role of rhizosphere microbes in determining crop quality and flavor, but the effects of phyllosphere (aboveground) microbes and metabolites remain unclear. Here, we examined the interaction between phyllosphere metabolites and the microbiome in three foxtail millet varieties with differing eating qualities: two high-eating-quality varieties (Yugu1, Jingu21) and one low-eating-quality variety (Daobaqi) in the field.

resultsThirteen metabolites were found to be depleted in the high-eating-quality varieties, four of which were identified as bitter compounds. These depleted metabolites were negatively correlated with the abundance of two microbial genera, Curtobacterium and Pseudomonas, enriched in the high-eating-quality foxtail millet panicles. Further analyses revealed that the abundance of these microbes was significantly associated with reduced bitterness and improved viscosity in the panicles. Additionally, synthetic microbial community experiments validated that these microbes enhanced foxtail millet quality by increasing the yellow coloration and reducing levels of bitter compounds.

conclusionsIn summary, the higher abundance of Curtobacterium and Pseudomonas in the panicles correlated with reduced bitter compounds and enhanced foxtail millet quality. This work provides new insights into the role of phyllosphere metabolites and microbiomes in determining crop quality.

Indexed as

MicrobiotaPlant LeavesSetaria PlantBacteriaPseudomonasRhizosphereTasteBitter compoundsEating qualityFoxtail milletMetabolitesPhyllosphere microbiome

Identifiers

PMID41199396
PMCPMC12590720

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.