Evidence map›Paper›PMID 41199175›Full record

ArticleBMC genomics2025

The interplay of recombination landscape and a transposable element in European populations of Chironomus riparius.

Laura Chiara Pettrich, Ann-Marie Waldvogel

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Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Laura Chiara PettrichInstitute of Zoology, Department of Biology, University of Cologne, Zülpicher Straße 47b, Cologne, 50674, Germany. l.pettrich@uni-koeln.de.
Ann-Marie WaldvogelInstitute of Zoology, Department of Biology, University of Cologne, Zülpicher Straße 47b, Cologne, 50674, Germany. a.waldvogel@tum.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBroadening our taxonomic scope beyond model species offers deeper insights into the evolutionary dynamics of genomic processes such as recombination and the proliferation of transposable elements (TEs). TEs can drive substantial genomic rearrangements, yet the interplay between TEs and recombination remains poorly understood.

resultsTo investigate population-specific recombination patterns, we analysed the distribution of the species-specific Cla-element in the non-biting midge Chironomus riparius. This TE is known for its dynamic behaviour, exhibiting high numbers of unique insertions and population-specific distribution patterns. Its distribution showed no consistent association with recombination rates at the chromosome-wide scale. However, the Cla-element was often found outside haplotype blocks, suggesting it may be spatially separated from regions with low recombination.

conclusionsNo strong association was found between the overall recombination landscape in C. riparius and the transposition activity of repetitive elements. Highlighting how the dynamics of transposable elements contribute to the complexity of genome evolution.

Indexed as

ChironomidaeDNA Transposable ElementsRecombination, GeneticAnimalsEuropeEvolution, MolecularHaplotypesDNA Transposable ElementsChironomidaeGenome evolutionPopulation genomicsRecombination variationTransposable elements

Identifiers

PMID41199175
PMCPMC12593919

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.