Evidence map›Paper›PMID 41198907›Full record

ArticleScientific reports2025

DEFB4A/hBD2, a non-invasive serum biomarker for detection of ulcerative colitis.

Soumyabrata Chatterjee, Anannya Chakraborty, Susree Roy, Deeya Roychowdhury, Ankita Karmakar, Antara Saha, Gopal Krishna Dhali, Soma Banerjee, Arka Banerjee

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Soumyabrata ChatterjeeCenter for Liver Research, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, Kolkata, India.
Anannya ChakrabortyCenter for Liver Research, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, Kolkata, India.
Susree RoyCenter for Liver Research, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, Kolkata, India.
Deeya RoychowdhuryCenter for Liver Research, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, Kolkata, India.
Ankita KarmakarCenter for Liver Research, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, Kolkata, India.
Antara SahaCenter for Liver Research, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, Kolkata, India.
Gopal Krishna DhaliDepartment of Gastroenterology, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, 244, Acharya Jagadish Chandra Bose Road, Kolkata, 700020, West Bengal, India.
Soma BanerjeeCenter for Liver Research, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, Kolkata, India.
Arka BanerjeeDepartment of Gastroenterology, School of Digestive Liver Diseases, Institute of Post Graduate Medical Education and Research, 244, Acharya Jagadish Chandra Bose Road, Kolkata, 700020, West Bengal, India. dr.arkobanerjee@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ulcerative colitis (UC) is a chronic episodic relapsing, and remitting inflammatory bowel disease with increasing frequency worldwide. Along with colonoscopy, faecal calprotectin (FCP) > 150 µg/g, elevated faecal Lactoferrin or elevated CRP are now considered for diagnosis and to take treatment decision. But there are a group of patients showing either symptomatic remission with high biomarkers or active disease having no biomarker. Hence, identification of biomarker with better diagnostic potential is still required for UC patients. To determine the deregulated genes in UC, microarray analysis was employed with colonic tissue of UC and irritable bowel syndrome (IBS) as control. Pathway enrichment analysis with differentially expressed (DE) genes revealed anti-microbial peptide mediated immune response pathways might play pivotal role in UC. Subsequently, qRT-PCR validation depicted that among the DE genes, DefensinsB4A (DEFB4A/hBD2) showed highest significant alterations in UC compared to IBS control. The data was also validated by immunohistochemistry with colonic tissue from IBS and active UC, and subsequently ELISA with healthy control (HC), active UC, and UC in remission. Crohn’s disease patient was considered as other inflammatory disease. A significantly high level of DEFB4A/hBD2 was noted in the serum of active UC patients compared to HC (p < 0.001) and it was significantly reduced in patients in remission (p < 0.001). ROC analysis revealed that DEFB4A/hBD2 with more than 220.74 pg/ml level can differentiate active UC patient from HC and active UC from patients in remission with 89% and 90% sensitivity, and 95% and 77% specificity respectively. The positive predictive values were 85.4% and 83% respectively while negative predictive value was 79% in both and 95% confidence intervals were (0.88–0.98) and (0.81–0.97) respectively. These findings suggest that DEFB4A/hBD2 could serve as a potential serum diagnostic marker for active UC patients; a decrease in its level indicates remission, though further validation with a larger sample size is needed.

Indexed as

beta-DefensinsColitis, UlcerativeAdultBiomarkersFemaleHumansMaleMiddle AgedROC Curvebeta-DefensinsBiomarkersDEFB4A protein, humanBiomarkerDefensinUCUlcerative colitis

Identifiers

PMID41198907
PMCPMC12592379

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.