Evidence map›Paper›PMID 41197237›Full record

ArticlePLoS computational biology2025

Cortical state contributions to neuronal response variability in the early visual cortex: A system identification approach.

Jinani Sooriyaarachchi, Chang'an A Zhan, Curtis L Baker

Abstract read
In one paragraph

Article in PLoS computational biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Jinani SooriyaarachchiDepartment of Physiology, McGill University, Montreal, Quebec, Canada.ORCID 0000-0002-8135-2088
Chang'an A ZhanSchool of Biomedical Engineering, Southern Medical University, Guangzhou, Guangdong, China.ORCID 0000-0001-8017-1886
Curtis L BakerDepartment of Ophthalmology and Visual Sciences, McGill University, Montreal, Quebec, Canada.ORCID 0000-0002-9988-3936

Funding

Canadian Institutes for Health ResearchFonds de Recherche du Québec - Santé
6 · The paper itself

Abstract

Neurons in the early visual cortex respond selectively to multiple features of visual stimuli, but they respond inconsistently to repeated presentation of the same visual stimulus. Such trial-to-trial response variabilities are often treated as random noise and addressed by simple trial-averaging to obtain the stimulus-driven response. However, response variability may primarily be caused by non-sensory factors, particularly by variations in cortical state. Here we recorded and analyzed neuronal spiking activity in response to natural images from areas 17 and 18 of cats, along with local population neuronal signals, i.e., local field potentials (LFPs) and multi-unit activity (MUA). Single neurons showed highly varying degrees of trial-to-trial response variability, even when recorded simultaneously. We used a variability ratio (VR) measure to quantify the trial-wise differences in neural responses, and two cortical state indicative measures, a global fluctuation index (GFI) calculated using MUA, and a synchrony index (SI) calculated from LFP signals. We propose a compact convolutional neural network model with parallel pathways, to capture the stimulus-driven activity and the cortical state-driven response variabilities. The stimulus-driven pathway is comprised of a spatiotemporal filter, a parametric rectifier and a Gaussian map, and the cortical state-driven pathway contains temporal filters for MUA and LFPs. The model parameters are fit to best predict each neuron's spiking activity. We further evaluated the improvements in estimated receptive fields of neurons when incorporating cortical state-related information in our system identification model. The fitted model performed with a significantly higher accuracy in predicting neural responses as well as qualitative improvements in the estimated receptive fields compared to a basic model with a stimulus-driven pathway alone. The neurons with higher response variability benefited more from the cortical state-driven pathway compared to less variable neurons. These results show that different neurons may differ greatly in their variability and in the degree of their relationship to indicators of cortical state fluctuations.

Indexed as

Models, NeurologicalNeuronsVisual CortexAction PotentialsAnimalsCatsComputational BiologyNeural Networks, ComputerPhotic Stimulation

Identifiers

PMID41197237
PMCPMC12614811

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.