Evidence map›Paper›PMID 41193973›Full record

ArticleBMC plant biology2025

Genome-wide identification of the MADS-box gene family and their role in the formation of faba bean (Vicia faba L.) growth habits.

Xianli Zhou, Changcai Teng, Zhihao Sun, Wanwei Hou, Hongyan Zhang, Tao Yang, Dong Zheng, Xiaoxing Peng, Shubao Lou, Rong Liu and 1 more

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Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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3 · Its place in the literature

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3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Xianli Zhou *Academy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Changcai Teng *Academy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Zhihao Sun *Academy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Wanwei HouAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Hongyan ZhangAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Tao YangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100000, China.
Dong ZhengAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Xiaoxing PengAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Shubao LouAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China.
Rong LiuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100000, China. liurong@caas.cn.
Yujiao LiuAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810086, Qinghai Province, China. 13997058356@qhu.edu.cn.

Funding

China Agriculture Research System of MOF and MARA CARS-08-G06Open Project of Laboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources 2023-SYS-007
6 · The paper itself

Abstract

backgroundThe MADS-box gene family is important in florescence development and flower organ formation. Members can directly or indirectly influence leguminous crops growth habits. However, this gene family in faba bean (Vicia faba L.) and its role in the development of various growth habits have not been systematically reported.

resultsWe identify 82 VfMADS genes in faba bean. Phylogenetic relationships, gene structure, conserved motifs, and expression patterns in varieties with different growth habits are investigated. Of them, 41 VfMADS proteins are classified as Type II and are attributed to 11 subfamilies. We report 12 pairs of tandem duplication events in VfMADS genes that involve 26 genes. Cis-acting elements in promoter regions suggest that these genes are involved mainly with hormone and stress responses. A new type of semi-determinate growth habit is reported for faba bean and transcriptome sequencing reveals 56 MADS-box genes to be differentially expressed in accessions with 3 types of growth habits. Significant differences are reported for expression levels of 10 VfMADS genes in different growth habits and tissues, indicating that VfMADS genes are closely related to floral transition, especially the floral termination at the shoot apex.

conclusionsWe systematically identify MADS-box genes in faba bean and investigate their physicochemical properties, phylogenetic relationships, chromosomal distribution, conserved motifs, cis-acting elements and expression patterns in faba bean with different growth habits. By doing so, we improve understanding of the regulatory network of growth habits and provide a theoretical basis for future studies on the functional characteristics of VfMADS genes in faba bean.

Indexed as

MADS Domain ProteinsMultigene FamilyPlant ProteinsVicia fabaGene Expression Regulation, PlantGenes, PlantGenome, PlantPhylogenyMADS Domain ProteinsPlant ProteinsGene expressionGenome-wide identificationGrowth habitsMADS-box gene familyVicia faba

Identifiers

PMID41193973
PMCPMC12590633

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