Evidence map›Paper›PMID 41193860›Full record

ArticleClinical and experimental medicine2025

Integrated bioinformatics decoding of the MASLD ceRNA network reveals novel therapeutic targets.

Shian Yu, Xinhua Jiang, Long Peng, Xianwen Zeng, Suqi Wen, Hui Xiong, Sumei Guo, Fufeng Huang, Hanwen Liu, Qiulan Luo

Abstract read
In one paragraph

Article in Clinical and experimental medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Shian Yu *Department of General Surgery, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China.
Xinhua Jiang *Department of General Surgery, Nanchang University Affiliated Infectious Diseases Hospital, Nanchang, 330006, Jiangxi, China.
Long Peng *Department of Neurosurgery, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China.
Xianwen ZengDepartment of Science and Education, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China.
Suqi WenDepartment of General Surgery, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China.
Hui XiongDepartment of General Surgery, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China.
Sumei GuoDepartment of General Surgery, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China.
Fufeng HuangGanzhou Fifth People's Hospital, Ganzhou Liver Disease Research Institute, Ganzhou, 341000, Jiangxi, China.
Hanwen LiuDepartment of Neurosurgery, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China. 18107971106@163.com.
Qiulan LuoDepartment of Neurosurgery, Ganzhou Hospital of Guangdong Provincial People's Hospital, Ganzhou, 341000, Jiangxi, China. 13097163996@163.com.

Funding

Ganzhou Municipal Hospital's "Type IV Talent" program SLRC-LJ2022005Jiangxi Provincial Key R&D Program General Project 20192BBGL70026
6 · The paper itself

Abstract

Metabolic dysfunction-associated steatotic liver disease (MASLD) is the leading cause of chronic liver disease worldwide. The mechanisms of liver injury in MASLD patients remain incompletely elucidated. This study aims to identify novel critical genes associated with MASLD using bioinformatics approaches. Microarray datasets were downloaded from the GEO database, and differentially expressed genes (DEGs) were identified. We performed enrichment analyses, constructed protein-protein interaction (PPI) networks, and visualized co-expression networks between mRNAs and miRNAs. Hub gene expression was validated using an independent dataset, and ROC curves were generated. Subsequent analyses included clinical correlation assessments and ceRNA network construction. Enrichment analyses revealed that the cell cycle, cytokine-cytokine receptor interactions, cellular senescence, oocyte meiosis, chemokine signaling pathways, viral protein-cytokine interactions, luteinizing hormone-mediated oocyte maturation, PPAR signaling, and p53 signaling pathways were significantly enriched. Three key genes (IL1β, TLR2, and TLR4) were validated using GEO datasets. The constructed ceRNA network, comprising miRNAs, circRNAs, mRNAs, and lncRNAs, identified the hsa-miR-21-5p-TLR2and hsa-miR-34a-IL1Bpathways as critical regulators of MASLD pathogenesis. IL1B, TLR2, TLR4, CCL2, and ICAM1were identified as central genes in MASLD. The hsa-miR-21-5p-TLR2and hsa-miR-34a-IL1Bpathways are potentially associated with MASLD development, offering insights for therapeutic targeting.

Indexed as

Computational BiologyGene Regulatory NetworksGene Expression ProfilingHumansMicroRNAsProtein Interaction MapsRNA, Competitive EndogenousRNA, Long NoncodingRNA, MessengerMicroRNAsRNA, Competitive EndogenousRNA, Long NoncodingRNA, MessengerCeRNA networkHub genesIntegrated bioinformaticsMetabolic dysfunction-associated steatotic liver disease

Identifiers

PMID41193860
PMCPMC12589229

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.