Evidence map›Paper›PMID 41191910›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2025

The PrecisionTox chemical library: creation of a chemical collection to discover evolutionary conserved biomolecular signatures of toxicity.

Rubén Martínez, Juan Carlos González-Sánchez, Stavroula I Sampani, Stefan Scholz, Beate I Escher, Luise Henneberger, Julia Huchthausen, Maurice Whelan, Thomas Dickmeis, Carsten Weiss and 2 more

Abstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Rubén MartínezLeitat Technological Center, Ecotoxicology & Biodegradability Unit, Terrassa, 08225, Spain.ORCID 0000-0001-9965-7042
Juan Carlos González-SánchezBiochemistry Center (BZH), Heidelberg University, Heidelberg, 69120, Germany.
Stavroula I SampaniEuropean Commission, Joint Research Centre (JRC), Ispra (VA), 21027, Italy.
Stefan ScholzDepartment of Ecotoxicology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, 04318, Germany.
Beate I EscherDepartment of Cell Toxicology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, 04318, Germany.
Luise HennebergerDepartment of Cell Toxicology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, 04318, Germany.
Julia HuchthausenDepartment of Cell Toxicology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, 04318, Germany.
Maurice WhelanEuropean Commission, Joint Research Centre (JRC), Ispra (VA), 21027, Italy.
Thomas DickmeisInstitute of Biological and Chemical Systems-Biological Information Processing, Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen, 76344, Germany.
Carsten WeissInstitute of Biological and Chemical Systems-Biological Information Processing, Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen, 76344, Germany.
John K ColbourneCentre for Environmental Research and Justice and School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK.
Jonathan H FreedmanCentre for Environmental Research and Justice and School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK.ORCID 0000-0002-6118-0290

Funding

European Union's Horizon 2020 Research and Innovation Program 965406NICHD NIH HHS HHSN273201400020CNIEHS NIH HHSNIH HHSU.S. Department of Health and Human Services
6 · The paper itself

Abstract

The large number and diversity of chemicals currently in use present significant challenges in assessing their human and environmental health risks due to a paucity of toxicological data. To address this shortage, high-throughput screening technologies are used to rapidly evaluate the toxicity of these chemicals. Suitable chemical libraries are crucial to evaluate the performance of these technologies and generate the cognate toxicity data. Unlike traditional chemical libraries designed for specific disease targets or receptor interactions, the PrecisionTox collection prioritizes diversity in targets and mechanisms of toxicity to ensure broad applicability in toxicity predictions to test the concept of phylotoxicology. Phylotoxicology proposes that mechanisms of toxicity are evolutionarily conserved among distantly related species. Furthermore, the application of phylotoxicology can contribute to the reduction of mammalian species in toxicity testing. Here, an approach for generating a chemical library based on chemical properties-physicochemical, biomolecular, and toxicological-as well as practical considerations, including compound availability, cost, purity, and shipping regulations, is reported. From an initial pool of over 1,500 nominees, a set of 200 chemicals was selected based on multiple criteria, including organ toxicity, environmental exposure, structure, modes of action, and toxicological relevance. Additionally, information on baseline toxicity, Absorption, Distribution, Metabolism, and Excretion properties and utility for in vitro testing was collected. This work underscores the necessity of thoughtful chemical selection to refine toxicological models, improve hazard identification, and support regulatory efforts to protect human and environmental health.

Indexed as

Small Molecule LibrariesToxicity TestsAnimalsHigh-Throughput Screening AssaysHumansSmall Molecule Librariesadverse outcome pathwaysbaseline-toxicity prediction modelchemical librariesnew approach methodologiesphysicochemical properties

Identifiers

PMID41191910
PMCPMC12646593

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.