Evidence map›Paper›PMID 41191525›Full record

ArticleBlood2026

Silencing of BCL11A by disrupting enhancer-dependent epigenetic insulation.

Kaili Wang, Juan Wang, Ruopeng Feng, Kseniia Dudnyk, Yoon Jung Kim, Jun Yi Stanley Lim, Michael Lee, Yuannyu Zhang, Xiaofei Gao, Yong Cheng and 5 more

Abstract read
In one paragraph

Article in Blood, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
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  5. Review
  6. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Kaili WangDepartment of Pathology, Center of Excellence for Leukemia Studies, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0009-0007-0521-2589
Juan WangDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL.ORCID 0000-0003-0933-3744
Ruopeng FengDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, TN.
Kseniia DudnykLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX.
Yoon Jung KimChildren's Medical Center Research Institute, Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX.ORCID 0000-0002-2942-294X
Jun Yi Stanley LimChildren's Medical Center Research Institute, Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX.ORCID 0000-0003-4160-7434
Michael LeeChildren's Medical Center Research Institute, Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX.
Yuannyu ZhangDepartment of Pathology, Center of Excellence for Leukemia Studies, St. Jude Children's Research Hospital, Memphis, TN.
Xiaofei GaoDepartment of Pathology, Center of Excellence for Leukemia Studies, St. Jude Children's Research Hospital, Memphis, TN.
Yong ChengDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-9314-0971
Stuart H OrkinDepartment of Pediatrics, Dana-Farber/Boston Children's Cancer and Blood Disorders Center, Harvard Medical School, Boston, MA.ORCID 0000-0002-0313-152X
Jian ZhouLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX.
Mitchell J WeissDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, TN.
Feng YueDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL.
Jian XuDepartment of Pathology, Center of Excellence for Leukemia Studies, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0003-1988-7337

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

abstractThe transcription factor BCL11A is a genetically and clinically validated regulator of the fetal-to-adult hemoglobin switch in human erythroid cells. CRISPR editing of an intronic enhancer within the BCL11A gene reactivates fetal hemoglobin (HbF) in adult erythroid cells, serving as the first CRISPR-based therapy for β-hemoglobinopathies. However, the molecular basis for the remarkable efficacy of CRISPR-mediated enhancer ablation remains elusive. Here, we describe a new genome architecture, an enhancer-dependent chromatin rosette, that is essential for epigenetic insulation and the developmentally regulated, hematopoietic lineage-specific expression of BCL11A. CRISPR-mediated disruption of the BCL11A erythroid enhancer impairs transcription of enhancer-driven RNAs and NIPBL-dependent cohesin loading, leading to the destabilization of the rosette structure, loss of chromatin insulation, and epigenetic silencing of BCL11A. Moreover, targeted depletion of enhancer RNAs using antisense oligonucleotides silences BCL11A by disrupting epigenetic insulation, causing HbF reactivation in adult erythroid cells. These findings uncover an essential role for enhancer-driven epigenetic insulation in transcriptional control, presenting a new strategy for the therapeutic targeting of BCL11A.

Indexed as

Carrier ProteinsEnhancer Elements, GeneticEpigenesis, GeneticGene SilencingNuclear ProteinsChromatinCRISPR-Cas SystemsErythroid CellsFetal HemoglobinHumansRepressor ProteinsBCL11A protein, humanCarrier ProteinsChromatinFetal HemoglobinNuclear ProteinsRepressor Proteins

Identifiers

PMID41191525
PMCPMC13077484

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.