Evidence map›Paper›PMID 41191515›Full record

ArticleGenomics, proteomics & bioinformatics2026

A Single-cell and Spatially Resolved Cell Atlas of Human Esophageal Squamous Cell Carcinoma.

Yong Shi 石勇, Ke An 安珂, Yu Qi 齐宇, Xinhan Zhang 张鑫涵, Yueqin Wang 王月琴, Xuran Zhang 张旭冉, Shaoxuan Zhou 周韶轩, Ouwen Li 李欧文, Yanan Song 宋亚楠, Jiayi Zhou 周佳熠 and 4 more

Abstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yong Shi 石勇Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0000-0002-6655-7405
Ke An 安珂Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0000-0002-3328-5802
Yu Qi 齐宇Department of Thoracic Surgery, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0000-0002-8755-4238
Xinhan Zhang 张鑫涵Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0009-0007-4922-3482
Yueqin Wang 王月琴Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0000-0003-0408-6721
Xuran Zhang 张旭冉Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0009-0008-2802-8271
Shaoxuan Zhou 周韶轩Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0009-0002-4380-9646
Ouwen Li 李欧文Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0009-0006-8737-2190
Yanan Song 宋亚楠Department of Thoracic Surgery, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0009-0003-3171-4022
Jiayi Zhou 周佳熠China National Center for Bioinformation, Beijing 100101, China.ORCID 0000-0002-3274-1802
Yue Du 杜玥Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0009-0002-0404-0184
Mingyang Hou 候明阳Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0009-0005-5210-8122
Yun-Gui Yang 杨运桂China National Center for Bioinformation, Beijing 100101, China.ORCID 0000-0002-2821-8541
Xin Tian 田鑫Department of Pharmacy, the First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.ORCID 0000-0003-0392-6362

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor heterogeneity and the suppressive microenvironment are key challenges that limit the effectiveness of cancer treatment. In this study, we systematically elucidated the molecular characteristics and mechanisms underlying the suppressive immune microenvironment using a combination of single-cell RNA sequencing, spatial transcriptomics, and metabolomics for a series of human esophageal squamous cell carcinoma and matched non-tumor tissues. We found that COL17A1+ epithelial cells exhibited greater malignancy, characterized by the accumulation of triglycerides and phosphocholine. We also identified a tumor-specific POSTN+ fibroblast subgroup. We identified a unique epithelial-fibroblast niche with low infiltration of effector immune cells and substantial lipid enrichment, composed of POSTN+ fibroblasts and COL17A1+ epithelial cells, in which their crosstalk contributed to tumor progression. We confirmed that the INHBA/TP63 axis played a key role in mediating the regulation of COL17A1+ tumor cells by POSTN+ fibroblasts. Our findings provide new insights into the characteristics of the tumor microenvironment and the crosstalk between tumor cells and fibroblasts, offering valuable multi-omics data for elucidating tumor progression mechanisms.

Indexed as

Esophageal NeoplasmsEsophageal Squamous Cell CarcinomaCell Adhesion MoleculesFibroblastsHumansPeriostinSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisSpatial TranscriptomicsTumor MicroenvironmentCell Adhesion MoleculesPeriostinPOSTN protein, humanEsophageal squamous cell cancerSingle-cell sequencingSpatial transcriptomicsTumor heterogeneityTumor microenvironment

Identifiers

PMID41191515
PMCPMC13433246

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.