Evidence map›Paper›PMID 41189300›Full record

ArticleAging cell2025

Single Cell Sequencing Identifies Distinct Cellular Alterations in Impaired Aged and Diabetic Wounds.

Leticia Rojas Cortez, Hamideh Afzali, Zhe Lyu, Min Liu, Adolfo Rojas, Jane Yang, Michael V Gonzalez, Erick Armingol, Michael Troka, Vinicius Maracaja-Coutinho and 3 more

Abstract read
In one paragraph

Article in Aging cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Transcriptomic Profiling of Diabetic Porcine Wound Healing Model Identifies Key Metabolic, Inflammatory, and Oxidative Stress Pathways.Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Leticia Rojas CortezDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-5967-0012
Hamideh AfzaliDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-1371-3283
Zhe LyuDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-5348-4278
Min LiuDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Adolfo RojasAdvanced Center for Chronic Diseases-ACCDiS, Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Santiago, Chile.ORCID 0000-0001-9800-3194
Jane YangDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0009-0007-2156-9019
Michael V GonzalezCenter for Cytokine Storm Treatment & Laboratory, Department of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0001-9741-475X
Erick ArmingolBioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, California, USA.ORCID 0000-0002-1546-9165
Michael TrokaDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0009-0000-1510-963X
Vinicius Maracaja-CoutinhoAdvanced Center for Chronic Diseases-ACCDiS, Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Santiago, Chile.ORCID 0000-0002-8873-9381
Patricio SmithSchool of Dentistry, Faculty of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile.ORCID 0000-0001-7314-621X
Kang I KoDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0003-2967-8846
Dana T GravesDepartment of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-4664-8529

Funding

Diabetes-enhanced Experimental PeriodontitisR01DE017732 · NIDCR · UNIV OF MED/DENT OF NJ-NJ DENTAL SCHOOL · PI DANA T GRAVES · 2007 to 2026
$6.5M
Mechanisms for Impaired Diabetic Wound HealingR01DE019108 · NIDCR · UNIV OF MED/DENT OF NJ-NJ DENTAL SCHOOL · PI DANA T GRAVES · 2009 to 2026
$4.8M
Wound healing mechanisms by distinct oral fibroblast populationR01DE030415 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI KO, KANG I · 2021 to 2025
$1.9M
NIDCR NIH HHS R01 DE017732NIDCR NIH HHS R01 DE019108NIDCR NIH HHS R01 DE030415NIH HHS R01DE017732-12A1NIH HHS R01DE019108NIH HHS R01DE030415
6 · The paper itself

Abstract

Impaired wound healing in aged and diabetic wounds involves complex cellular dysregulation that hinders tissue repair. Using single-cell RNA sequencing (scRNA-seq) and validation techniques, we investigated impaired wound healing to identify whether there were significant changes linked to each condition. Comparative mucosal wound analysis revealed distinct differences between diabetic and normoglycemic (NG)-aged mice, which had an impact on connective tissue formation and epithelial closure. Wounds in NG-aged mice exhibited prolonged granulation tissue and upregulation of genes linked to chemotaxis, cell migration, neutrophil degranulation, and antimicrobial defense pathways compared to the diabetic wounds. In comparison to healing in young animals, wounds in NG-aged mice had a shift in fibroblast subtypes with fewer matrix-producing myofibroblasts and increased inflammatory fibroblasts. Furthermore, wounds in NG-aged mice versus wounds in diabetic mice had an upregulation of lytic enzymes, with striking differences in cathepsin-expressing fibroblasts. Since diabetic wounds healed more slowly than wounds in NG-aged mice, the results suggest that the upregulation of lytic enzymes that characterized diabetic wounds is particularly damaging to healing. In addition to the transcriptional differences, pseudotime analysis revealed that fibroblasts in wounds from diabetic mice progressed towards a protease-enriched state, while those in aged mice shifted towards an inflammatory phenotype. This is the first study to directly compare aged and diabetic healing at the single-cell level and provides distinct molecular mechanisms that may allow more precise therapeutic targets to improve healing in aged and diabetic wounds.

Indexed as

AgingDiabetes Mellitus, ExperimentalSingle-Cell AnalysisWound HealingAnimalsFibroblastsMaleMiceMice, Inbred C57BLaginggingivahyperglycemiaoral mucosarepairstromal

Identifiers

PMID41189300
PMCPMC12686554

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.