Evidence map›Paper›PMID 41188593›Full record

ReviewPlant molecular biology2025

cis- and trans-elements for the transcriptional regulation of sugar responsive genes: from current knowledge to future applications.

María-Isabel Cruz-López, Josefat Gregorio, Elizabeth Cordoba

Abstract readReview
In one paragraph

Review in Plant molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

María-Isabel Cruz-LópezDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad #2001, Col. Chamilpa, C.P. 62210, Cuernavaca, Morelos, México.
Josefat GregorioSecretaría de Ciencia, Humanidades, Tecnología e Innovación-Comisión Nacional del Agua, Av. Insurgentes Sur 1582, Col. Crédito Constructor, Del. Benito Juárez, C.P. 03940, Ciudad de México, México.
Elizabeth CordobaDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad #2001, Col. Chamilpa, C.P. 62210, Cuernavaca, Morelos, México. elizabeth.cordoba@ibt.unam.mx.ORCID http://orcid.org/0000-0003-2217-7678

Funding

Consejo Nacional de Ciencia y Tecnología CF 2019-171884Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México IN208620
6 · The paper itself

Abstract

Sugar metabolism in plants is highly dynamic throughout their life cycle, driven by the continuous production, accumulation, and distribution of these molecules along the plant body. To cope with fluctuating sugar levels during their life cycle, plants have developed mechanisms to sense and respond to these changes accordingly. Noteworthy, sugars not only fulfill metabolic roles, but also act as signaling molecules that regulate plant growth and development. Of the array of sugar responses, their influence on gene expression is particularly significant, as it impacts a wide range of physiological processes, including key economic traits of plants. However, despite the broad regulatory role of sugars in gene expression, the transcriptional mechanisms behind their regulation remain largely unknown. Among the many sugar-regulated genes in plants, efforts have been focused on identifying cis-regulatory elements (CREs) and trans-regulatory factors (transcription factors, TFs) involved in gene sugar responsiveness at transcriptional level, but only some have been experimentally confirmed. Therefore, this review outlines those approaches used for identifying sugar CREs and TFs, along with an updated compilation of the elements associated with glucose and sucrose signaling transcriptional responses. In addition, the evolutionary conservation of these regulatory elements in different plant species is addressed, highlighting those with potential biotechnological applications. In summary, the gathering of this information has the purpose of updating our current knowledge regarding the mechanism of how sugars exert its effect on gene expression. This understanding is essential for advancing in the manipulation of these regulatory elements to improve key traits in economically valuable plants, such as oil and sugar accumulation, crop yield, and fruit quality.

Indexed as

Carbohydrate MetabolismGene Expression Regulation, PlantPlantsSugarsPlant ProteinsSignal TransductionTranscription FactorsPlant ProteinsSugarsTranscription FactorsBiotechnologycis-regulatory elementsGene regulationSugar signalingtrans-regulatory elements

Identifiers

PMID41188593
PMCPMC12586236

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.