Evidence map›Paper›PMID 41188230›Full record

ArticleNature communications2025

Basic reproduction number varies markedly between closely related pandemic Escherichia coli clones.

Fanni Ojala, Henri Pesonen, Rebecca A Gladstone, Tommi Mäklin, Gerry Tonkin-Hill, Pekka Marttinen, Jukka Corander

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fanni Ojala *Department of Computer Science, Aalto University, Konemiehentie 2, Espoo, Finland.ORCID http://orcid.org/0000-0001-5390-5725
Henri Pesonen *Oslo Center for Biostatistics and Epidemiology, Oslo University Hospital, Sognsvanssveien 9, Oslo, Norway.ORCID http://orcid.org/0000-0003-4500-2926
Rebecca A GladstoneDepartment of Biostatistics, University of Oslo, Sognsvanssveien 9, Oslo, Norway.ORCID http://orcid.org/0000-0002-7993-3051
Tommi MäklinHelsinki Institute for Information Technology HIIT, Department of Mathematics and Statistics, University of Helsinki, Yliopistonkatu 3, Helsinki, Finland.ORCID http://orcid.org/0000-0003-0970-3514
Gerry Tonkin-HillDepartment of Biostatistics, University of Oslo, Sognsvanssveien 9, Oslo, Norway.ORCID http://orcid.org/0000-0003-4397-2224
Pekka MarttinenDepartment of Computer Science, Aalto University, Konemiehentie 2, Espoo, Finland.ORCID http://orcid.org/0000-0001-7078-7927
Jukka CoranderDepartment of Biostatistics, University of Oslo, Sognsvanssveien 9, Oslo, Norway. jukka.corander@medisin.uio.no.ORCID http://orcid.org/0000-0002-7752-1942

Funding

Academy of Finland (Suomen Akatemia) 351148Norges Forskningsråd (Research Council of Norway) 332645
6 · The paper itself

Abstract

Extra-intestinal pathogenic Escherichia coli ubiquitously colonize the human gut and represent clinically the most significant bacterial species causing urinary tract infections and bacteremia. During the last two decades clades of the ST131 lineage have spread globally, but it remains unknown how their transmission dynamics compare to the basic reproduction numbers (R

Indexed as

Basic Reproduction NumberEscherichia coliEscherichia coli InfectionsHumansPandemics

Identifiers

PMID41188230
PMCPMC12586494

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.