Evidence map›Paper›PMID 41174976›Full record

ArticleBiotechnology and bioengineering2026

Towards Rapid Calibration of Bioprocess Quantification Models Using Single Compound Raman Spectra: A Comparison of Four Approaches.

Maarten Klaverdijk, Lisa A Smulders, Marcel Ottens, Marieke E Klijn

Abstract readComparative Study
In one paragraph

Article in Biotechnology and bioengineering, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Maarten KlaverdijkDepartment of Biotechnology, Delft University of Technology, Delft, The Netherlands.ORCID 0009-0000-7744-8901
Lisa A SmuldersDepartment of Biotechnology, Delft University of Technology, Delft, The Netherlands.
Marcel OttensDepartment of Biotechnology, Delft University of Technology, Delft, The Netherlands.
Marieke E KlijnDepartment of Biotechnology, Delft University of Technology, Delft, The Netherlands.

Funding

This project is funded by the Department of Biotechnology at Delft University of Technology.
6 · The paper itself

Abstract

In-line Raman spectroscopy combined with accurate quantification models can offer detailed real-time insights into a bioprocess by monitoring key process parameters. However, traditional approaches for model calibration require extensive data collection from multiple bioreactor runs, resulting in process-specific models that are sensitive to operational changes. These challenges can be tackled by simplifying experimental data generation or implementation of computational methods to obtain synthetic and augmented Raman spectra. In this study, we utilized a small experimental dataset of 16 single compound spectra to calibrate quantification models by using partial least squares (PLS) and indirect hard modeling (IHM), leading to comparable rRMSEP values for glucose (4.8% and 4.2%), ethanol (11.6% and 6.3%), and biomass (16.2% and 10.0%) when applied to yeast batch and fed-batch bioprocesses. Subsequently, isolated spectral features extracted during IHM were used to generate fully synthetic spectral datasets for PLS model calibration, resulting in rRMSEPs of 3.2% and 14.5% for glucose and ethanol, respectively. Finally, spectra from a single batch process were augmented with the same isolated spectral features, and calibration with these augmented spectra reduced rRMSEP by 18.6% point (glucose) and 4.3% point (ethanol) compared to process-only calibrated models. This study demonstrates how different approaches may support robust development and rapid implementation of Raman spectroscopy-based models while minimizing experimental efforts, where even complete independence of process data can be achieved.

Indexed as

BioreactorsModels, BiologicalSaccharomyces cerevisiaeSpectrum Analysis, RamanBatch Cell Culture TechniquesBiomassCalibrationEthanolGlucoseEthanolGlucosebioprocessingdata augmentationin‐line measurementsprocess analytical technologyRaman spectroscopySaccharomyces cerevisiae

Identifiers

PMID41174976
PMCPMC12779188

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.