ArticleMethods in molecular biology (Clifton, N.J.)2026
Thorough RNA Interactome Data Analysis Based on Direct Duplex Detection Data.
Article in Methods in molecular biology (Clifton, N.J.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
RNA-RNA interactions play a crucial role in cellular processes by regulating gene expression, RNA stability, and posttranscriptional modifications. These interactions have emerged as key players in the intricate network of RNA-based regulatory mechanisms. In recent years, Direct Duplex Detection methods have been widely used to map these interactions on a large scale but require sophisticated data analysis. We describe the analysis of these DDD data using RNAnue to determine RNA-RNA interactions. RNAnue is available at https://github.com/Ibvt/RNAnue .
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