Evidence map›Paper›PMID 41171483›Full record

ArticleAntonie van Leeuwenhoek2025

Antimicrobial potential of a new Streptomyces species isolated from a brazilian tropical coastal shrubland.

Rafael Rocha Rangel, Nildo Alfredo Nhampossa, Dora Dos Santos Costa, Daniela Sales Alviano, Celuta Sales Alviano, Rodrigo Pires do Nascimento

Abstract read
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In one paragraph

Article in Antonie van Leeuwenhoek, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Draft genome ofMicrobiology resource announcements · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rafael Rocha RangelLaboratory of Structures of Surface of Microorganisms, Institute of Microbiology Paulo de Góes, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.ORCID http://orcid.org/0000-0002-3398-1621
Nildo Alfredo NhampossaLaboratory of Ecology and Microbial Processes, School of Chemistry, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.ORCID http://orcid.org/0009-0009-5605-364X
Dora Dos Santos CostaLaboratory of Structures of Surface of Microorganisms, Institute of Microbiology Paulo de Góes, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.ORCID http://orcid.org/0000-0003-1136-4865
Daniela Sales AlvianoLaboratory of Structures of Surface of Microorganisms, Institute of Microbiology Paulo de Góes, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.ORCID http://orcid.org/0000-0003-3694-046X
Celuta Sales AlvianoLaboratory of Structures of Surface of Microorganisms, Institute of Microbiology Paulo de Góes, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.ORCID http://orcid.org/0000-0002-0806-6712
Rodrigo Pires do NascimentoLaboratory of Ecology and Microbial Processes, School of Chemistry, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil. rodrigopires@eq.ufrj.br.ORCID http://orcid.org/0000-0002-1801-4262

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Advancing microbial bioprospecting is crucial for discovering novel sources of antimicrobial compounds (ACs). Members of the phylum Actinomycetota, particularly the genus Streptomyces, are renowned producers of a wide variety of bioactive metabolites, including several clinically relevant antibiotics. In the present study, 182 Brazilian actinomycete strains were screened for antimicrobial activity against major human pathogens, namely Staphylococcus aureus MRSA BMB9393, Pseudomonas aeruginosa ATCC 9027, Escherichia coli ATCC 11229, Aspergillus niger ATCC 16404, Candida albicans ATCC 10231, and Cryptococcus neoformans T1444. Among these, strain AM6-12 exhibited strong and broad-spectrum inhibitory activity. To optimize its metabolite production, AM6-12 was grown in various media (ISP-1, ISP-2, Mueller-Hinton, and glycerol-peptone broth) under submerged fermentation at 28 °C for 12 days. Supernatants were collected through centrifugation and filtration and tested via disk diffusion with 100, 150, and 200 μL volumes. Inhibition zones were measured after 36 h at 35 °C. Further experiments in ISP-2 medium under varying aeration conditions (180 vs. 210 rpm; different flask volumes) showed improved activity at 180 rpm, notably against MRSA (2.6 cm) and P. aeruginosa (1.25 cm), indicating oxygen availability influences metabolite synthesis. Genomic sequencing revealed a 7.88 Mb genome with a G + C content of 72.0 mol%. The 16S rRNA gene shared 100% identity with Streptomyces malaysiense MUSC 136, but multilocus sequence analysis (MLSA) of 16S rRNA, atpD, gyrB, rpoB, recA, and trpB showed divergence above the species threshold (MLSA distance > 0.007). Additionally, ANI (< 95%) and digital DNA-DNA hybridization (dDDH < 70%) supported its classification as a distinct species. These findings position AM6-12 as a promising novel Streptomyces species for antimicrobial production.

Indexed as

Anti-Infective AgentsStreptomycesAnti-Bacterial AgentsBrazilCandida albicansMicrobial Sensitivity TestsPhylogenyPseudomonas aeruginosaRNA, Ribosomal, 16SAnti-Bacterial AgentsAnti-Infective AgentsRNA, Ribosomal, 16SActinomycetotaAntimicrobial metabolitesPhylogenomic analysisStreptomycesSubmerged fermentation

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.