Evidence map›Paper›PMID 41169728›Full record

ReviewFrontiers in plant science2025

Opportunities and challenges in the application of spatiotemporal transcriptomics in plant research.

Peilei Deng, Jiaruo Huang, Wencan He, Zhiyuan Li, Cun Guo, Guoxin Chen, Xiaoxu Li, Kejun Zhong, Wei Luo, Bo Kong

Abstract readReview
In one paragraph

Review in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Peilei DengTechnology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.
Jiaruo HuangTechnology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.
Wencan HeTechnology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.
Zhiyuan LiTobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, China.
Cun GuoTobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, China.
Guoxin ChenBeijing Life Science Academy, Beijing, China.
Xiaoxu LiTechnology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.
Kejun ZhongTechnology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.
Wei LuoTechnology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.
Bo KongTechnology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spatiotemporal heterogeneity is recognized as a key driver of functional diversity in tissues. Spatial transcriptomics, which integrates high-throughput transcriptomics with high-resolution tissue imaging, enables the precise mapping of gene expression patterns at the tissue section level. This technology overcomes the limitations of traditional transcriptomics by providing spatial context and applying unbiased bioinformatics approaches. With the rapid advancement of sequencing technologies, spatial transcriptomics is a pivotal tool for exploring cell fate determination, tissue development, and disease mechanisms, and its underlying principles, technical variations, practical performance, and future directions collectively provide robust theoretical and methodological support for systematically unveiling the spatiotemporal regulation of life processes.

Indexed as

bioinformatics approachesmulti-omics and computational biologyplant biologyplant researchspatiotemporal transcriptomics

Identifiers

PMID41169728
PMCPMC12568615

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.