Evidence map›Paper›PMID 41168653›Full record

ArticleAnnals of the New York Academy of Sciences2025

Mycoplasma agassizii Multilocus Sequence Typing Using Nanopore Sequencing: Insights Into Genetic Diversity and Isolate Characterization.

Carla Cacciotto, Rosanna Zobba, Manuel Louro, Margarida Alves, Andreia Valença, Rui Patrício, Emanuela Bazzoni, Marco Pittau, Roberta Lecis, Alberto Alberti

Abstract read
In one paragraph

Article in Annals of the New York Academy of Sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Carla CacciottoDepartment of Veterinary Medicine, University of Sassari, Sassari, Italy.
Rosanna ZobbaDepartment of Veterinary Medicine, University of Sassari, Sassari, Italy.
Manuel LouroFaculty of Veterinary Medicine, Lusófona University-Lisbon University Center, Lisbon, Portugal.
Margarida AlvesFaculty of Veterinary Medicine, Lusófona University-Lisbon University Center, Lisbon, Portugal.
Andreia ValençaFaculty of Veterinary Medicine, Lusófona University-Lisbon University Center, Lisbon, Portugal.
Rui PatrícioFaculty of Veterinary Medicine, Lusófona University-Lisbon University Center, Lisbon, Portugal.
Emanuela BazzoniDepartment of Veterinary Medicine, University of Sassari, Sassari, Italy.
Marco PittauDepartment of Veterinary Medicine, University of Sassari, Sassari, Italy.
Roberta LecisDepartment of Veterinary Medicine, University of Sassari, Sassari, Italy.
Alberto AlbertiDepartment of Veterinary Medicine, University of Sassari, Sassari, Italy.

Funding

Università degli Studi di Sassari
6 · The paper itself

Abstract

Mycoplasma agassizii (Mycoplasmopsis agassizii) is a major pathogen responsible for upper respiratory tract disease (URTD) in tortoises, contributing to worldwide population declines. Despite its significance, tools for strain-level identification and epidemiological tracking remain limited. This study proposes a Multilocus Sequence Typing (MLST) scheme based on eight housekeeping genes (uvrB, tpiA, gyrB, efTu, rpoB, uvrA, gmK, and atpG), combined with Nanopore sequencing, to characterize M. agassizii isolates from tortoises in Italy and Portugal. Among 127 samples, 73 (57.5%) tested positive for M. agassizii. Analysis of 15 isolates revealed 14 distinct sequence types (STs). High genetic diversity was observed, even among samples from the same rescue centers. No correlation was found between STs and geographic origin or tortoise species. Four loci (uvrB, gyrB, rpoB, and gmK) were sufficient to discriminate all STs at a haplotype diversity cut-off ≥ 0.83. The standardized index of association (I

Indexed as

Genetic VariationMultilocus Sequence TypingMycoplasmaMycoplasma InfectionsNanopore SequencingAnimalsItalyPhylogenyPortugalTurtlesMLSTMycoplasma agassiziiNanopore sequencingtortoisesURTD

Identifiers

PMID41168653
PMCPMC12728326

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.