Evidence map›Paper›PMID 41167841›Full record

ArticleMethods in enzymology2025

Threonine aldolase-catalyzed stereoselective radical α-alkylation of amino acids.

Tim Ke, Yang Yang

Abstract read
In one paragraph

Article in Methods in enzymology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

2 authors.

Tim KeDepartment of Chemistry and Biochemistry, University of California Santa Barbara, Santa Barbara, CA, United States.
Yang YangDepartment of Chemistry and Biochemistry, University of California Santa Barbara, Santa Barbara, CA, United States; Biomolecular Science and Engineering Program, University of California Santa Barbara, Santa Barbara, CA, United States. Electronic address: yang@chem.ucsb.edu.

Funding

Pyridoxal Radical Biocatalysis for the Stereoselective Production of Non-Canonical Amino AcidsR01EB036084 · NIBIB · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI Yang Yang · 2025 to 2026
$1.0M
NIBIB NIH HHS R01 EB036084
6 · The paper itself

Abstract

Pyridoxal 5'-phosphate (PLP)-dependent enzymes comprise a structurally and functionally diverse enzyme superfamily underlying amino acid metabolism and other biologically significant processes. While PLP enzymes that use a two-electron mechanism for substrate activation have found widespread applications in biocatalysis and biotechnology, synthetically useful PLP radical enzymes have remained rare until recently. In 2023, our group demonstrated that naturally occurring two-electron PLP enzymes can be reprogrammed to catalyze radical-mediated transformations via a photoredox mechanism. In this chapter, we describe the repurposing and engineering of PLP-dependent threonine aldolases to allow for the enantioselective α-alkylation of abundant amino acid donors as a useful means to prepare valuable non-canonical amino acids. Our engineered radical PLP enzymes allow intermolecular C-C bond forming reactions to occur with excellent enantioselectivity, giving rise to α-tri and tetrasubstituted non-canonical amino acids with excellent enantioselectivity. By integrating photochemistry with PLP enzymology, we expect a broad spectrum of traditionally closed-shell PLP enzymes to be reprogrammed to catalyze novel radical-mediated stereoselective C-C bond formation.

Indexed as

BiocatalysisGlycine HydroxymethyltransferaseAlkylationAmino AcidsFree RadicalsPhotochemical ProcessesProtein EngineeringPyridoxal PhosphateStereoisomerismSubstrate SpecificityAmino AcidsFree RadicalsGlycine HydroxymethyltransferasePyridoxal Phosphateenzyme repurposingphotochemistypyridoxal 5'-phosphate enzymeradical chemistrythreonine aldolase

Identifiers

PMID41167841
PMCPMC12742965

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.