Evidence map›Paper›PMID 41167839›Full record

ArticleMethods in enzymology2025

Engineering a PLP-dependent Mannichase.

Shaonan Liu, Yang Hai

Abstract read
In one paragraph

Article in Methods in enzymology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Shaonan LiuDepartment of Chemistry and Biochemistry, University of California, Santa Barbara, Santa Barbara, CA, United States.
Yang HaiDepartment of Chemistry and Biochemistry, University of California, Santa Barbara, Santa Barbara, CA, United States. Electronic address: hai@chem.ucsb.edu.

Funding

Understanding the specificity and non-native catalytic activity of PLP-dependent enzymesR35GM151205 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI Yang Hai · 2023 to 2026
$1.8M
NIGMS NIH HHS R35 GM151205
6 · The paper itself

Abstract

Pyridoxal 5'-phosphate (PLP)-dependent enzymes are versatile biocatalysts known for their ability to form diverse C-C, C-N, and C-S bonds. Despite this catalytic diversity, a PLP-dependent enzyme capable of promoting an intermolecular Mannich reaction to access α,β-diamino acids has not been described. Here, we report the engineering of LolT, a PLP-dependent Mannich cyclase from the loline alkaloid biosynthetic pathway, into a synthetically valuable Mannichase. Using iterative site-saturation mutagenesis and a double high-throughput screening platform, we identified mutations that significantly enhance LolT's non-native Mannichase activity. The best-performing variant, LolT

Indexed as

Protein EngineeringPyridoxal PhosphateBiocatalysisHigh-Throughput Screening AssaysMutagenesis, Site-DirectedMutationPyridoxal PhosphateBiocatalysisLolTMannich reactionPLP-dependent enzymeProtein engineeringα,β-Diamino acid

Identifiers

PMID41167839
PMCPMC12614450

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.