Evidence map›Paper›PMID 41165908›Full record

ArticleArchives of virology2025

Genomic and phylogenetic insights into a new mastrevirus from Leptochloa chinensis.

Muqmirah Naseem, Guangming Xiao, Yanan Li, Zhongtian Xu, Taiyun Wei, Hui Wang

Abstract read
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In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Muqmirah NaseemState Key Laboratory of Agricultural and Forestry Biosecurity, Fujian Agriculture and Forestry University, 350002, Fuzhou, Fujian, China.
Guangming XiaoState Key Laboratory of Agricultural and Forestry Biosecurity, Fujian Agriculture and Forestry University, 350002, Fuzhou, Fujian, China.
Yanan LiState Key Laboratory of Agricultural and Forestry Biosecurity, Fujian Agriculture and Forestry University, 350002, Fuzhou, Fujian, China.
Zhongtian XuState Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Key Laboratory of Biotechnology in Plant Protection of Ministry of Agriculture and Zhejiang Province, Institute of Plant Virology, Ningbo University, Ningbo, China.
Taiyun WeiState Key Laboratory of Agricultural and Forestry Biosecurity, Fujian Agriculture and Forestry University, 350002, Fuzhou, Fujian, China. weitaiyun@fafu.edu.cn.
Hui WangState Key Laboratory of Agricultural and Forestry Biosecurity, Fujian Agriculture and Forestry University, 350002, Fuzhou, Fujian, China. whsmilewh@163.com.ORCID http://orcid.org/0000-0001-7320-1418

Funding

National Natural Science Foundation of China 32472537Natural Science Foundation of Fujian Province of China 2022J01580
6 · The paper itself

Abstract

Using high-throughput sequencing, a novel mastrevirus was discovered infecting the weed Leptochloa chinensis and was designated as "Leptochloa chinensis mastrevirus" (LcMAV). The full genome sequence of LcMAV is a 2825 nt long. Phylogenetic analysis and sequence comparisons revealed that LcMAV is genetically distinct but shares significant sequence similarity with Sporobolus striate mosaic virus 1 (SSMV-1), suggesting a close evolutionary relationship. The LcMAV genome contains four major open reading frames encoding a movement protein (MP), a capsid protein (CP), and two replication-associated proteins (RepA and Rep) and also contains two intergenic regions (IRs). The virus was identified through comprehensive genomic sequencing, utilizing both RNA and DNA extraction methods, as well as rolling-circle amplification (RCA) for recovery of the full genome. These findings emphasize the role of L. chinensis as a host for newly emerging viruses that might endanger nearby rice crops, highlighting the need for enhanced surveillance and monitoring of viral diversity in agricultural systems. This discovery contributes to our understanding of the evolutionary dynamics of the family Geminiviridae and emphasizes the role of weeds in the transmission of viruses to economically important crops.

Indexed as

GeminiviridaeGenome, ViralPhylogenyPlant DiseasesGenomicsHigh-Throughput Nucleotide SequencingOpen Reading FramesPoaceaeRNA, ViralViral ProteinsRNA, ViralViral Proteins

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.