Evidence map›Paper›PMID 41165253›Full record

ArticleJournal of integrative plant biology2026

OsSAE1 orchestrates the antagonistical regulation of gibberellin and abscisic acid signaling to control rice seed germination.

Dinglin Xiao, Yuxiang Li, Bingkun Ge, Zihan Zhao, Zhiheng Suo, Juan Wang, Chunxia Yan, Zhi Qi, Rongfeng Huang, Ruidang Quan and 1 more

Abstract read
In one paragraph

Article in Journal of integrative plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Dinglin XiaoBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0000-0001-9043-669X
Yuxiang LiBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0000-0002-6946-8547
Bingkun GeBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0009-0004-0008-765X
Zihan ZhaoBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0009-0006-7467-7235
Zhiheng SuoBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0009-0009-3783-4993
Juan WangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0000-0003-1636-4450
Chunxia YanKey Laboratory of Forage and Endemic Crop Biology, Ministry of Education, School of Life Science, Inner Mongolia University, Hohhot, 010021, China.ORCID https://orcid.org/0009-0002-5073-286X
Zhi QiKey Laboratory of Forage and Endemic Crop Biology, Ministry of Education, School of Life Science, Inner Mongolia University, Hohhot, 010021, China.ORCID https://orcid.org/0000-0002-0224-5701
Rongfeng HuangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0000-0002-3039-0850
Ruidang QuanBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0000-0002-0206-4759
Hua QinBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID https://orcid.org/0000-0001-9788-7290

Funding

Agricultural Science and Technology Innovation Program CAAS-ZDRW202407the Central Public-interest Scientific Institution Basal Research Fund 1610392023004the National Key Research and Development Program of China 2022YFD1201700the National Natural Science Foundation of China 32030079the National Natural Science Foundation of China 32472037the Youth innovation of Chinese Academy of Agricultural Sciences Y2024QC14
6 · The paper itself

Abstract

The plant life cycle and the promise of crop yield start with successful seed germination, which requires an optimal balance between the phytohormones abscisic acid (ABA) and gibberellin (GA). Here, we report that the APETALA 2-type transcription factor SALT AND ABA RESPONSE ERF 1 (OsSAE1) antagonistically modulates ABA and GA signaling to control seed germination in rice (Oryza sativa L.). We show that knocking out OsSAE1 delays seed germination, concomitant with the accumulation of SLENDER RICE1 (OsSLR1), a GA signaling repressor DELLA protein; importantly, GA application rescued the seed germination defect of ossae1 mutants. OsSAE1 directly activates transcription of the GA biosynthesis gene OsKS1 and represses that of the GA metabolism gene OsGA2ox3, resulting in higher GA levels. Moreover, OsSLR1 physically interacts with ABA-INSENSITIVE 5 (OsABI5), a key ABA signaling component, enhancing the transcriptional activation capacity of OsABI5 toward its target genes to regulate seed germination. The temporal expression pattern of OsSAE1 supports its role in orchestrating GA and ABA signaling to modulate seed germination and seed dormancy. Different OsSAE1 haplotypes differentially affected OsSAE1 transcript levels and seed germination rates, illustrating the potential of the elite OsSAE1 haplotype for genetic improvement of seed germination. Overall, our study reveals that OsSAE1 controls rice seed germination by regulating the balance between ABA and GA, providing a pivotal selection target for breeding rice cultivars suitable for direct seeding.

Indexed as

Abscisic AcidGerminationGibberellinsOryzaPlant ProteinsSeedsGene Expression Regulation, PlantSignal TransductionAbscisic AcidGibberellinsPlant Proteinsantagonism of ABA−GA signalingAP2 transcription factor OsSAE1elite haplotyperice direct seedingseed germination

Identifiers

PMID41165253
PMCPMC12782891

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.