Evidence map›Paper›PMID 41164960›Full record

ArticleJournal of microbiology (Seoul, Korea)2025

Genome-based classification of Paraniabella aurantiaca gen. nov., sp. nov., isolated from soil and taxonomic reclassification of five species within the genus Niabella.

Yong-Seok Kim, Yerang Yang, Miryung Kim, Do-Hoon Lee, Chang-Jun Cha

Abstract read
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Article in Journal of microbiology (Seoul, Korea), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Notification of changes in taxonomic opinion previously published outside theInternational journal of systematic and evolutionary microbiology · 2026
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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Yong-Seok KimDepartment of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea.
Yerang YangDepartment of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea.
Miryung KimDepartment of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea.
Do-Hoon LeeDepartment of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea.
Chang-Jun ChaDepartment of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea.

Funding

Ministry of EnvironmentMinistry of Science and ICTNational Institute of Biological Resources NIBR202502203National Research Foundation of Korea 2023R1A2C1003654
6 · The paper itself

Abstract

A Gram-stain-negative, aerobic, non-motile, rod-shaped, and orange-pigmented bacterium, designated CJ426T, was isolated from ginseng soil in Anseong, Korea. Strain CJ426T grew optimally on Reasoner's 2A agar at 30°C and pH 7.0 in the absence of NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that strain CJ426T belonged to the family Chitinophagaceae and had the highest sequence similarity with Niabella hibiscisoli KACC 18857T (98.7%). The 16S rRNA gene sequence similarities with other members of the genus Niabella ranged from 92.3% to 98.1%. Phylogenomic analyses and overall genomic relatedness indices, including average nucleotide identity, average amino acid identity, and the percentage of conserved proteins values, supported the classification of strain CJ426T as a representative of a novel genus within the family Chitinophagaceae. Furthermore, genome-based analyses suggested that five members of the genus Niabella, including N. aquatica, N. defluvii, N. ginsengisoli, N. hibiscisoli, and, N. yanshanensis, should be separated from other Niabella species and be assigned as a novel genus. The major isoprenoid quinone of strain CJ426T was menaquinone-7 (MK-7). The predominant polar lipids were phosphatidylethanolamine and six unidentified aminolipids. The major fatty acids were iso-C15:0, iso-C15:1 G, and iso-C17:0 3-OH. The genome of strain CJ426T was 6.3 Mbp in size, consisting of three contigs, with a G + C content of 41.9%. Based on a polyphasic taxonomic approach, strain CJ426T represents a novel genus and species within the family Chitinophagaceae, for which the name Paraniabella aurantiaca gen. nov., sp. nov. is proposed. The type strain is CJ426T (= KACC 23908T = JCM 37728T).

Indexed as

BacteroidetesGenome, BacterialPhylogenySoil MicrobiologyBacterial Typing TechniquesBase CompositionDNA, BacterialFatty AcidsPanaxPhospholipidsRepublic of KoreaRNA, Ribosomal, 16SSequence Analysis, DNAVitamin K 2DNA, BacterialFatty AcidsPhospholipidsRNA, Ribosomal, 16SVitamin K 2genomeOGRIParaniabellaParaniabella aurantiacareclassification

Identifiers

PMID41164960
PMCPMC13576996

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.