Evidence map›Paper›PMID 41162790›Full record

ArticleArchives of virology2025

Exchanging the stem-loop A promoter of Zika virus with the corresponding region of tick-borne encephalitis virus generates a chimeric virus that replicates in vertebrate and mosquito cells.

Chandra S Tangudu, Wichan Dankaona, Bradley J Blitvich

Abstract read
In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Chandra S TanguduDepartment of Veterinary Microbiology and Preventive Medicine, College of Veterinary Medicine, 2116 Veterinary Medicine, Iowa State University, Ames, IA, 50011, USA.
Wichan DankaonaDepartment of Veterinary Microbiology and Preventive Medicine, College of Veterinary Medicine, 2116 Veterinary Medicine, Iowa State University, Ames, IA, 50011, USA.
Bradley J BlitvichDepartment of Veterinary Microbiology and Preventive Medicine, College of Veterinary Medicine, 2116 Veterinary Medicine, Iowa State University, Ames, IA, 50011, USA. blitvich@iastate.edu.ORCID http://orcid.org/0000-0002-9857-5755

Funding

Identification of the untranslated sequence elements and virus-host interactions that modulate flavivirus host-specificityR01AI114720 · NIAID · IOWA STATE UNIVERSITY · PI Bradley J Blitvich · 2015 to 2026
$2.9M
Division of Intramural Research, National Institute of Allergy and Infectious Diseases R01AI114720Fulbright Program PHD/0021/2561NIAID NIH HHS R01 AI114720
6 · The paper itself

Abstract

The 5' end of the orthoflavivirus genome contains a stem-loop structure, known as stem-loop A (SLA), which interacts with the viral polymerase (the NS5 protein) and functions as the promoter during RNA replication. Previously, we replaced the SLA of Zika virus (ZIKV; a mosquito/vertebrate orthoflavivirus) with the corresponding region of Long Pine Key virus (a dual-host-associated insect-specific orthoflavivirus), producing a chimeric virus capable of replicating in both mosquito and vertebrate cells. Here, we investigated whether additional chimeric viruses could be created by replacing the SLA of ZIKV with those of other orthoflaviviruses that are maintained in different transmission cycles, namely: tick-borne encephalitis virus (TBEV; a tick/vertebrate orthoflavivirus), Culex flavivirus (a classical insect-specific orthoflavivirus), Modoc virus (a rodent-associated vertebrate-specific orthoflavivirus), and Rio Bravo virus (a bat-associated vertebrate-specific orthoflavivirus). Exchanging the SLA of ZIKV with that of TBEV produced a chimeric virus capable of replicating in mosquito and vertebrate cells, whereas the other SLA replacements did not yield infectious virus. The chimeric virus replicated more slowly, reached lower titers, and produced smaller plaques than wild-type ZIKV in vertebrate cells. The chimeric virus also exhibited reduced fitness in mosquito cells. These findings demonstrate that replacement of the SLA of ZIKV with the corresponding region of TBEV produces a chimeric virus that replicates in both mosquito and vertebrate cells, revealing that ZIKV NS5 is able to recognize and bind to the TBEV promoter, rendering it active. This study highlights the importance of SLA-polymerase compatibility in flavivirus replication and provides insight into the molecular basis of host adaptation.

Indexed as

Encephalitis Viruses, Tick-BornePromoter Regions, GeneticVirus ReplicationZika VirusAnimalsCell LineChlorocebus aethiopsCulexGenome, ViralHumansRNA, ViralVero CellsViral Nonstructural ProteinsRNA, ViralViral Nonstructural Proteins

Identifiers

PMID41162790
PMCPMC12572013

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.