Evidence map›Paper›PMID 41162555›Full record

ArticleScientific reports2025

Alginate formulations with high loads of zebularine and retinoic acid promote tissue growth and innervation and induce extensive epigenetic repatterning.

Paulina Słonimska, Jakub Baczyński-Keller, Rafał Płatek, Milena Deptuła, Maria Dzierżyńska, Justyna Sawicka, Oliwia Król, Paweł Sosnowski, Magdalena Koczkowska, Anna Kostecka and 9 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Paulina SłonimskaLaboratory for Regenerative Biotechnology, Gdańsk University of Technology, Gdańsk, 80-233, Poland.
Jakub Baczyński-KellerLaboratory for Regenerative Biotechnology, Gdańsk University of Technology, Gdańsk, 80-233, Poland.
Rafał PłatekLaboratory for Regenerative Biotechnology, Gdańsk University of Technology, Gdańsk, 80-233, Poland.
Milena DeptułaLaboratory of Tissue Engineering and Regenerative Medicine, Department of Embryology, Medical University of Gdańsk, Gdańsk, 80-211, Poland.
Maria DzierżyńskaDepartment of Biomedicinal Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, 80-308, Poland.
Justyna SawickaDepartment of Biomedicinal Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, 80-308, Poland.
Oliwia KrólDepartment of Biochemistry, Medical University of Gdańsk, Gdańsk, 80-211, Poland.
Paweł SosnowskiLaboratory for Regenerative Biotechnology, Gdańsk University of Technology, Gdańsk, 80-233, Poland.
Magdalena Koczkowska3P-Medicine Laboratory, Medical University of Gdańsk, Gdańsk, 80-210, Poland.
Anna Kostecka3P-Medicine Laboratory, Medical University of Gdańsk, Gdańsk, 80-210, Poland.
David K CrossmanGenomic Core Facility, University of Alabama at Birmingham, Birmingham, AL, 35233, USA.
Michael R CrowleyGenomic Core Facility, University of Alabama at Birmingham, Birmingham, AL, 35233, USA.
Piotr SassLaboratory for Regenerative Biotechnology, Gdańsk University of Technology, Gdańsk, 80-233, Poland.
Ryszard Tomasz SmoleńskiDepartment of Biochemistry, Medical University of Gdańsk, Gdańsk, 80-211, Poland.
Piotr M SkowronDepartment of Molecular Biotechnology, Faculty of Chemistry, University of Gdańsk, Gdańsk, 80- 308, Poland.
Arkadiusz Piotrowski3P-Medicine Laboratory, Medical University of Gdańsk, Gdańsk, 80-210, Poland.
Michał PikułaLaboratory of Tissue Engineering and Regenerative Medicine, Department of Embryology, Medical University of Gdańsk, Gdańsk, 80-211, Poland.
Sylwia Rodziewicz-MotowidłoDepartment of Biomedicinal Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, 80-308, Poland.
Paweł SachadynLaboratory for Regenerative Biotechnology, Gdańsk University of Technology, Gdańsk, 80-233, Poland. psach@pg.edu.pl.

Funding

Narodowe Centrum Badań i Rozwoju "BIONANOVA", No. TECHMATSTRATEG2/410747/11/NCBR/2019.
6 · The paper itself

Abstract

The study presents the development of a small-molecule epigenetic regenerative therapy that combines a demethylating agent, zebularine, with retinoic acid, acting as a transcriptional activator, and an alginate carrier. Subcutaneously injected formulations based on 2% sodium alginate containing high loads of zebularine (240 mg/ml) and retinoic acid (0.8 mg/ml) promoted regenerative responses in a mouse model of ear pinna punch wound involving the restoration of tissue architecture, the growth of nerve and vessel networks, and extensive alterations in gene methylation and expression profiles with no adverse effects in the animals. Among the remarkable changes in global gene methylation are those in neurodevelopmental genes. In vitro studies showed rapid discharge of zebularine but not retinoic acid from the alginate formulations. Live ultrasound imaging demonstrated gradual absorption of the subcutaneously injected alginate formulations, which may explain the in vivo activity of retinoic acid following subcutaneous administration. Cell culture tests exhibited no significant cytotoxicity of the alginate formulations. The simplicity of composition, preparation, and administration of alginate-based drug formulations is a distinctive advantage. The effective induction of regenerative response, together with a high safety profile of subcutaneously administered pro-regenerative alginate formulations, opens the way to testing further regenerative therapies for hard-to-reach lesions.

Indexed as

AlginatesCytidineEpigenesis, GeneticTretinoinAnimalsDNA MethylationGlucuronic AcidHexuronic AcidsHumansMiceWound HealingAlginatesCytidineGlucuronic AcidHexuronic Acidspyrimidin-2-one beta-ribofuranosideTretinoinAlginate carrierEpigenetic therapyPharmacoregenerationRetinoic acidTissue regenerationZebularine

Identifiers

PMID41162555
PMCPMC12572142

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.