Evidence map›Paper›PMID 41160190›Full record

ArticleClinical oral investigations2025

The site-specific subgingival microbiome across periodontal conditions and its relationship with clinical parameters.

Kexin Chen, Xiaolin Ren, Ruolan Du, Lei Lei, Ran Cheng, Tao Hu

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In one paragraph

Article in Clinical oral investigations, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kexin ChenState Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Frontier Innovation Center for Dental Medicine Plus, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China.
Xiaolin RenState Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Frontier Innovation Center for Dental Medicine Plus, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China.
Ruolan DuState Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Frontier Innovation Center for Dental Medicine Plus, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China.
Lei LeiState Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Frontier Innovation Center for Dental Medicine Plus, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China. leilei0504@126.com.
Ran ChengState Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Frontier Innovation Center for Dental Medicine Plus, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China. chengran@scu.edu.cn.
Tao HuState Key Laboratory of Oral Diseases & National Center for Stomatology & National Clinical Research Center for Oral Diseases & Frontier Innovation Center for Dental Medicine Plus, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China.

Funding

Sichuan Science and Technology Program Nos 2024NSFSC0543the National Natural Science Foundation of China Nos 81970948
6 · The paper itself

Abstract

objectivesTo investigate site-specific subgingival microbiota by precise probing depth (PD) and their associations with clinical parameters across periodontal states. MATERIALS AND

methodsParticipants included healthy-periodontium (n = 20), gingivitis (n = 20) and periodontitis (n = 20). 218 subgingival biofilm samples were collected from PD-based-sites, including health (n = 60), gingivitis (n = 64) and periodontitis (n = 94). Samples further categorized as unstable (PD = 1-3 mm, gingivitis) and dysbiosis (PD ≥ 4 mm, periodontitis). Full-length 16 S rRNA sequencing was performed using third-generation technology.

resultsSelenomonas sputigena (S. sputigena), Filifactor alocis (F. alocis), Aggregatibacter segnis (A. segnis), Prevotella intermedia (P. intermedia), Campylobacter gracilis (C. gracilis), Porphyromonas gingivalis (P. gingivalis) positively correlated with clinical parameters-bleeding on probing, modified gingival index, plaque index and PD. Haemophilus parainfluenzae (H. parainfluenzae) negatively correlated with clinical parameters. Microbiota in gingivitis (PD = 4 mm) resembled with periodontitis deep-sites (PD ≥ 4 mm). Periodontitis (PD ≥ 4 mm) showed a dysbiotic microbial profile, where P. gingivalis, P. intermedia and F. alocis were key taxa.

conclusionsPositive correlations with clinical parameters encompassed F. alocis, P. intermedia, C. gracilis, P. gingivalis, etc., while H. parainfluenzae showed negative relations. Gingivitis (PD = 4 mm) exhibited a microbiota resembled the PD ≥ 4 mm of periodontitis. CLINICAL RELEVANCE: Gingivitis pseudopockets (PD = 4 mm) may exhibited periodontitis-like microbiota, suggesting that such sites should be monitored as early risk indicators for disease progression.

Indexed as

GingivaGingivitisMicrobiotaPeriodontitisAdultBiofilmsDysbiosisFemaleHumansMaleMiddle AgedPeriodontal Index16S rRNA gene sequencingFlorida probeGingivitisPeriodontitisProbing depthSubgingival microbiota

Identifiers

PMID41160190

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.