Evidence map›Paper›PMID 41156828›Full record

ArticleMicroorganisms2025

Seasonal Variations of the Nebraska Salt Marsh Microbiome: Environmental Impact, Antibiotic Resistance, and Unique Species.

Emma K Stock, Ketlyn Rota, Brandi Dunn, Madelynn Vasquez, Daniela Hernandez-Velazquez, Alyssia Lespes, Solenn Bosmans, Jace C Smith, John A Kyndt

Abstract read
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In one paragraph

Article in Microorganisms, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Emma K StockCollege of Science and Technology, Bellevue University, Bellevue, NE 68005, USA.
Ketlyn RotaCollege of Science and Technology, Bellevue University, Bellevue, NE 68005, USA.
Brandi DunnCollege of Science and Technology, Bellevue University, Bellevue, NE 68005, USA.
Madelynn VasquezCollege of Science and Technology, Bellevue University, Bellevue, NE 68005, USA.ORCID 0009-0009-7691-4320
Daniela Hernandez-VelazquezFaculty of Biology, Universidad Veracruzana, Xalapa 91000, Mexico.
Alyssia LespesDepartment GDT, Erasmus Brussels University of Applied Sciences and Art, 1090 Jette, Belgium.
Solenn BosmansDepartment GDT, Erasmus Brussels University of Applied Sciences and Art, 1090 Jette, Belgium.
Jace C SmithCollege of Science and Technology, Bellevue University, Bellevue, NE 68005, USA.
John A KyndtCollege of Science and Technology, Bellevue University, Bellevue, NE 68005, USA.ORCID 0000-0001-7168-8015

Funding

EPSCoR NE NSF OIA-2044049
6 · The paper itself

Abstract

The Nebraska Salt Marshes are unique inland saltwater ecosystems, and this exploratory study is aimed at understanding the microbial composition and diversity that is providing the underlying support for these ecosystems. The microbiome shows both temporal and spatial variations that are concurrent with seasonal variations in salinity, temperature, and vegetation growth. Whole genome metagenomics analysis showed the predominance of purple non-sulfur bacteria in each season, indicating their importance in the marsh ecosystem. The fall season showed the highest microbial diversity and coincided with the highest levels of antimicrobial resistance markers to a variety of natural and synthetic antibiotics. In addition to the metagenomics approach, we also isolated and sequenced several unique species, most of them belonging to what appear to be new species of purple non-sulfur or purple sulfur bacteria. Both the metagenomics analysis and isolated species indicate that the nitrogen and sulfur cycling is well balanced in these marshes by a high relative abundance of purple bacteria. Noteworthy is the isolation of a new strain of

Indexed as

antibiotic resistanceNebraska salt marshespurple bacteriaRhodobacterseasonal microbiome variationsVibrio cholerae

Identifiers

PMID41156828
PMCPMC12566255

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.