Evidence map›Paper›PMID 41156641›Full record

ArticlePathogens (Basel, Switzerland)2025

Molecular Transmission Network and Pretreatment Drug Resistance of Newly Diagnosed HIV-1 Infections in Taizhou, a Coastal City in Eastern China, from 2021-2023.

Junxiao Lin, Haijiang Lin, Guixia Li, Shanling Wang, Tingting Wang, Qiguo Meng, Tingting Hua, Yali Xie, Jiafeng Zhang, Weiwei Shen

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Junxiao LinTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.
Haijiang LinTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.
Guixia LiTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.
Shanling WangTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.
Tingting WangTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.
Qiguo MengTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.ORCID 0000-0003-4917-3845
Tingting HuaTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.
Yali XieTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.
Jiafeng ZhangDepartment of HIV/AIDS Control and Prevention, Zhejiang Provincial Center for Disease Control and Prevention, No. 3399, Binsheng Road, Hangzhou 310051, China.ORCID 0000-0003-4288-5516
Weiwei ShenTaizhou Municipal Center for Disease Control and Prevention, Taizhou Municipal Institute of Health Supervision, No 4123, Zhongxin Avenue, Taizhou 318000, China.

Funding

Special Support Program for High Level Talents in Taizhou City TZ2022-2
6 · The paper itself

Abstract

objectiveThis study conducted a comprehensive analysis of molecular transmission networks and pretreatment drug resistance (PDR) in newly diagnosed HIV-1 infections in Taizhou, China.

methodsFrom 2021 to 2023, we collected 1126 plasma samples from newly diagnosed HIV patients in Taizhou. The HIV pol gene was amplified, and the obtained sequence was used to construct a maximum likelihood (ML) phylogenetic tree and molecular transmission network. PDR-related mutations were analyzed based on the Stanford University HIV Resistance Database. We conducted genotyping analysis and analysis of factors related to the larger clusters (≥10).

resultsWe successfully amplified and sequenced the pol region from 937 (83.2%, 937/1126) treatment-naïve HIV-1 patients, each with comprehensive epidemiological documentation. Phylogenetic characterization revealed significant subtype heterogeneity, with CRF07_BC (42.1%, 395/937), CRF01_AE (27.6%, 259/937) and CRF08_BC (22.1%, 209/937) being the most prevalent. Notably, 11.4% of the sequenced population (107/937) presented detectable PDR mutations. Univariate analysis revealed that larger clusters (≥10) are more inclined to be aged ≥60, divorced or widowed, have high or technical secondary school education, and have sexual contact with homosexuality. Multivariate analysis revealed that age ≥60 years and not having a PDR mutation (

conclusionsMolecular transmission networks suggest that CRF08_BC is spreading rapidly among the older male population. Consequently, targeted interventions aimed at this population are crucial for halting the ongoing rapid dissemination of this subtype.

Indexed as

Drug Resistance, ViralHIV-1HIV InfectionsAdultAnti-HIV AgentsChinaFemaleGenotypeHumansMaleMiddle AgedMutationPhylogenypol Gene Products, Human Immunodeficiency VirusYoung AdultAnti-HIV Agentspol Gene Products, Human Immunodeficiency VirusCRF08_BCHIV-1molecular transmission networkpretreatment drug resistance

Identifiers

PMID41156641
PMCPMC12567033

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.