Evidence map›Paper›PMID 41155316›Full record

ArticleInternational journal of molecular sciences2025

Confounder-Adjusted Differentiation of Colorectal Cancer via Dynamic Propagation of Pathway Influence.

Larissa Margareta Batrancea, Ömer Akgüller, Mehmet Ali Balcı, Gizem Çalıbaşı Koçal, Lucian Gaban

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Larissa Margareta BatranceaDepartment of Business, Babeş-Bolyai University, 7 Horea Street, 400174 Cluj-Napoca, Romania.ORCID 0000-0001-6254-2970
Ömer AkgüllerDepartment of Mathematics, Faculty of Science, Mugla Sitki Kocman University, 48000 Muğla, Turkey.ORCID 0000-0002-7061-2534
Mehmet Ali BalcıDepartment of Mathematics, Faculty of Science, Mugla Sitki Kocman University, 48000 Muğla, Turkey.ORCID 0000-0003-1465-7153
Gizem Çalıbaşı KoçalTranslational Oncology Department, Institute of Oncology, Dokuz Eylul University, 35340 Izmir, Turkey.ORCID 0000-0002-3201-4752
Lucian GabanFaculty of Economics, "1 Decembrie 1918" University of Alba Iulia, 510009 Alba Iulia, Romania.ORCID 0000-0001-7317-4798

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer (CRC) exhibits profound molecular heterogeneity between left-sided and right-sided tumors with distinct therapeutic responses that current static genomic analyses incompletely explain. We developed Dynamic Functional Influence Computation (DynaFIC), a computational framework modeling time-resolved signal propagation through biological networks to quantify functional influence beyond static expression levels. Using the GSE39582 dataset comprising 583 primary CRC samples, we performed confounder-adjusted differential expression analysis controlling for microsatellite instability status,

Indexed as

Colorectal NeoplasmsSignal TransductionFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMaleMicrosatellite InstabilityMutationProto-Oncogene Proteins B-rafProto-Oncogene Proteins B-rafcolorectal cancer heterogeneitynetwork analysissystems biologytherapeutic resistancetumor laterality

Identifiers

PMID41155316
PMCPMC12562654

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.