Evidence map›Paper›PMID 41154808›Full record

ArticleBiology2025

Evaluation of Marker Gene-Based In Silico Antimicrobial Resistance Prediction Tools.

Woo Jin Kim, Chorong Hahm, Dongin Kim, Daewon Kim, Ja Young Seo, Jeong Yeal Ahn, Pil Whan Park, Yiel Hea Seo, Joohee Lee

Abstract read
In one paragraph

Article in Biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Woo Jin KimEONE Laboratories, Incheon 22014, Republic of Korea.ORCID 0000-0003-4999-1493
Chorong HahmEONE Laboratories, Incheon 22014, Republic of Korea.ORCID 0000-0002-5880-8972
Dongin KimEONE Laboratories, Incheon 22014, Republic of Korea.ORCID 0009-0008-0132-5305
Daewon KimDepartment of Laboratory Medicine, Gil Medical Center, Gachon University College of Medicine, Incheon 21565, Republic of Korea.ORCID 0000-0002-3487-5943
Ja Young SeoDepartment of Laboratory Medicine, Gil Medical Center, Gachon University College of Medicine, Incheon 21565, Republic of Korea.ORCID 0000-0002-1894-1365
Jeong Yeal AhnDepartment of Laboratory Medicine, Gil Medical Center, Gachon University College of Medicine, Incheon 21565, Republic of Korea.ORCID 0000-0001-9842-0748
Pil Whan ParkDepartment of Laboratory Medicine, Gil Medical Center, Gachon University College of Medicine, Incheon 21565, Republic of Korea.ORCID 0000-0002-4955-6240
Yiel Hea SeoDepartment of Laboratory Medicine, Gil Medical Center, Gachon University College of Medicine, Incheon 21565, Republic of Korea.ORCID 0000-0001-6849-122X
Joohee LeeDepartment of Laboratory Medicine, Gil Medical Center, Gachon University College of Medicine, Incheon 21565, Republic of Korea.ORCID 0009-0008-4761-1315

Funding

Korea National Institute of Health 2024ER211500
6 · The paper itself

Abstract

The monitoring and surveillance of antimicrobial resistance (AMR) is an important procedure in clinical patient management and epidemiological public health. Conventionally, culture-based tools such as disk diffusion methods or broth dilution methods for antibiotic susceptibility tests are used. While culture-independent approaches, such as PICRUSt2, Tax4Fun, or MicFunPred, have recently been tried based on predictive functional profiling using the 16S rRNA marker gene, evaluations of AMR tools are scarce. A total of 20

Indexed as

antimicrobial genes (ARGs)antimicrobial resistance AMREscherichia colimarker gene-based prediction toolsMicFunPredPICRUSt2Tax4Fun

Identifiers

PMID41154808
PMCPMC12561268

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.