Evidence map›Paper›PMID 41154617›Full record

ArticleBiomolecules2025

Identification of Novel Quantitative Trait Loci and Candidate Genes Associated with Grain Yield and Related Traits Under Low-Light Stress Conditions in Rice.

Soumya Mohanty, Swagatika Das, Darshan Panda, Nalini Kanta Choudhury, Baneeta Mishra, Ranjan Kumar Jena, Rameswar Prasad Sah, Anil Kumar Chandrappa, Devanna Basavantraya Navadagi, Reshmi Raj K R and 5 more

Abstract read
In one paragraph

Article in Biomolecules, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Soumya MohantyICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0001-7909-2427
Swagatika DasICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.
Darshan PandaICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0003-4479-9320
Nalini Kanta ChoudhuryICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0001-9442-3095
Baneeta MishraICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0009-0006-0152-4748
Ranjan Kumar JenaICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.
Rameswar Prasad SahICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0003-1724-3685
Anil Kumar ChandrappaICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0002-7359-1249
Devanna Basavantraya NavadagiICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0002-7404-6111
Reshmi Raj K RICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0009-0006-8227-5295
Awadhesh KumarICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0002-4428-1030
Sharat Kumar PradhanICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0001-7716-0721
Sanghamitra SamantarayICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0002-5440-6378
Mirza Jaynul BaigICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.
Lambodar BeheraICAR-Central Rice Research Institute, Cuttack 753006, Odisha, India.ORCID 0000-0002-8947-2332

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Low light intensity is a major abiotic stress that severely affects rice yields, particularly in India and Southeast Asia, causing yield reductions of 35-40% during the wet season compared to the dry season. Tolerant rice genotypes exhibit adaptive changes at anatomical, physiological, biochemical, and molecular levels under low-light stress, enabling higher yields compared to susceptible varieties. Our study identified 20 novel QTLs associated with grain yields and nine related traits under low-light and control (normal)-light conditions, using a recombinant inbred line (RIL) population derived from the cross between the low-light-tolerant variety Swarnaprabha and the low-light-susceptible variety IR8. Across the

Indexed as

Edible GrainLightOryzaQuantitative Trait LociStress, PhysiologicalChromosome MappingChromosomes, PlantGene Expression Regulation, PlantGenes, PlantPhenotypePlant ProteinsPlant Proteinsabiotic stresscandidate genesgrain yieldhub genelow lightquantitative trait locirice

Identifiers

PMID41154617
PMCPMC12562436

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.