Evidence map›Paper›PMID 41153442›Full record

ArticleGenes2025

Integrated GWAS and Transcriptome Analysis to Identify Genes Underlying Plant Height and Ear Height Plasticity in Maize Germplasm.

Liang Tu, Pengfei Liu, Angui Wang, Dong Wang, Yunfang Zhu, Gang Li, Yulin Jiang, Xun Wu, Zhiming Zhang, Zehui Chen and 1 more

Abstract read
In one paragraph

Article in Genes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Liang TuInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Pengfei LiuInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Angui WangInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Dong WangState Key Laboratory of High-Efciency Production of Wheat-Maize Double Cropping, The Shennong Laboratory, Henan Agricultural University, Zhengzhou 450002, China.ORCID 0000-0002-6854-4106
Yunfang ZhuInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Gang LiBiotechnology Research Institute, Fujian Academy of Agricultural Sciences, Fuzhou 350003, China.
Yulin JiangInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Xun WuInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.ORCID 0000-0002-7715-4521
Zhiming ZhangState Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian 271018, China.ORCID 0000-0001-5112-8387
Zehui ChenInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Xiangyang GuoInstitute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.

Funding

National Natural Science Foundation of China 32160451the Major projects of agricultural biological breeding 2023ZD0402806
6 · The paper itself

Abstract

backgroundIntegrating tropical and temperate maize germplasm represents a pivotal strategy for driving genetic innovation, with phenotypic plasticity serving as a critical indicator of successful integration.

methodsWe analyzed 155 inbred lines across 5 contrasting environments to investigate variation and plasticity in plant height (PH) and ear height (EH).

resultsGenome-wide association studies (GWAS) identified 77 loci associated with phenotypic plasticity, while the transcriptome profiling of Mo17 and T32 in Zhangye and Sanya revealed 9 candidate genes potentially regulating these traits, including

conclusionsThese results provide valuable genetic resources and theoretical foundations for germplasm improvement. The identified genes hold promise for molecular marker development, facilitating the breeding of elite lines with stable PH and EH across environments, thereby contributing to maize improvement and enhancing global food security.

Indexed as

TranscriptomeZea maysGene Expression ProfilingGene Expression Regulation, PlantGenome-Wide Association StudyPhenotypePlant BreedingPolymorphism, Single NucleotideQuantitative Trait Locigenetic miningphenotypic plasticitytemperate–tropical maize

Identifiers

PMID41153442
PMCPMC12563082

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.