Evidence map›Paper›PMID 41147895›Full record

ArticleProtein science : a publication of the Protein Society2025

Calorimetric characterization of the stability and activity of trimethylamine-N-oxide (TMAO) demethylase from Methylocella silvestris BL2.

Federico Cappa, Nakia Polidori, Daniele Giuriato, Danilo Correddu, Arianna Marucco, Sheila J Sadeghi, Renzo Levi, Gianluca Catucci, Gianfranco Gilardi

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors.

Federico CappaDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.
Nakia PolidoriDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.
Daniele GiuriatoDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.
Danilo CorredduDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.ORCID 0000-0003-4945-8904
Arianna MaruccoDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.
Sheila J SadeghiDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.
Renzo LeviDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.
Gianluca CatucciDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.ORCID 0000-0002-4593-4507
Gianfranco GilardiDepartment of Life Sciences and Systems Biology, University of Torino, Torino, Italy.ORCID 0000-0002-6559-276X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trimethylamine-N-oxide (TMAO) is an organic osmolyte found in numerous species and is known to have a range of biological effects. TMAO has recently garnered attention in the medical field due to its association with cardiovascular diseases, underscoring the need for its reliable detection and quantification. Current methods for TMAO analysis often rely on hazardous reagents or costly analytical instrumentation. In this study, we focus on Methylocella silvestris BL2, which produces a TMAO-demethylase (Tdm), with the aim of developing a direct enzymatic assay for TMAO detection. We report on the bioinformatic analysis, expression, purification, and calorimetric characterization of Tdm. Structural predictions generated by AlphaFold suggest that the protein, previously described as hexameric, is organized as a trimer of dimers. The 3D model reveals that the binding sites for the metal cofactors Zn

Indexed as

Bacterial ProteinsMethylaminesOxidoreductases, N-DemethylatingCalorimetryCalorimetry, Differential ScanningEnzyme StabilityModels, MolecularBacterial ProteinsMethylaminesOxidoreductases, N-DemethylatingtrimethyloxamineAlphaFolddifferential scanning calorimetryisothermal titration calorimetryTMAOTMAO‐demethylase

Identifiers

PMID41147895
PMCPMC12560246

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.