Evidence map›Paper›PMID 41146239›Full record

ArticleBiotechnology for biofuels and bioproducts2025

Rhamnogalacturonan I is a recalcitrant pectin domain during Clostridium thermocellum-mediated deconstruction of switchgrass biomass.

Ajaya K Biswal, Neal N Hengge, Melani A Atmodjo, Paul E Abraham, Nancy L Engle, Sushree S Mohanty, Ian M Black, Xiaochun Cheng, David Ryno, Parastoo Azadi and 3 more

Abstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

13 authors.

Ajaya K BiswalDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA. biswalajaya@ccrc.uga.edu.
Neal N HenggeBiosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
Melani A AtmodjoDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA.
Paul E AbrahamBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA.
Nancy L EngleBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA.
Sushree S MohantyComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Ian M BlackComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Xiaochun ChengComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
David RynoComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Parastoo AzadiComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Timothy J TschaplinskiBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA.
Yannick J BombleBiosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
Debra MohnenDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA. dmohnen@ccrc.uga.edu.

Funding

U.S. Department of Energy, Office of Science, Biological and Environmental Research Program ERKP886
6 · The paper itself

Abstract

backgroundLiquid fuels from lignocellulosic feedstocks are required for transition to a sustainable bioeconomy. However, the recalcitrance of carbon-containing feedstock cell walls to deconstruction poses a barrier to cost effective biological conversion of plant biomass to biofuels. One-step consolidated bioprocessing (CBP) in which anaerobic thermophilic bacteria convert lignocellulosic biomass into liquid fuels is a platform for overcoming the recalcitrance of plant biomass.

resultsThe amounts of hemicellulosic and pectic polysaccharides, two complex cell wall glycans that contribute to plant biomass recalcitrance and that are partially solubilized during CBP of switchgrass aerial biomass by Clostridium thermocellum were evaluated in the liquor, solid residues and residue washate recovered during a 120-h CBP process. After 120 h, 24% of milled switchgrass was solubilized in the C. thermocellum CBP platform. Higher concentrations of arabinose, xylose, galactose, and glucose accumulated in the CBP-fermentation liquor and washate compared to fermentation controls without C. thermocellum, indicating that C. thermocellum solubilized hemicelluloses, but did not fully metabolize them. After five days of fermentation, the relative amount of rhamnose in the solid residues increased by 16% compared to controls, and CBP solid residues had more than 23% increased reactivity against RG-I reactive monoclonal antibodies, indicating that the pectic polymer rhamnogalacturonan I (RG-I) was not effectively solubilized from switchgrass biomass by C. thermocellum CBP. Similarly, the amount of mannose (Man) in the CBP solid residues increased by 7% and reactivity against galactomannan reactive antibodies increased by greater than 14%, indicating that the hemicellulosic polymer galactomannan was also resistant to degradation by C. thermocellum during CBP fermentation.

conclusionsThese findings show that C. thermocellum is unable to effectively degrade RG-I pectic and galactomannan hemicellulosic components in switchgrass biomass. Targeting these polymers for improved solubilization could enhance the efficiency of conversion of grass biomass to biofuels.

Identifiers

PMID41146239
PMCPMC12560456

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.