Evidence map›Paper›PMID 41144424›Full record

ArticlePloS one2025

Machine learning reveals distinct T-cell receptor clusters in plasma cell dyscrasias compared to healthy controls.

David G Coffey, Yong Zhang, Elizabeth Hill, Frank Cross, Reena Philip, Marc R Theoret, Ola Landgren, Andrea C Baines, Dickran Kazandjian

Abstract read
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Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

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No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

David G CoffeyDivision of Myeloma, Sylvester Comprehensive Cancer Center, University of Miami, Miami, Florida, United States of America.ORCID https://orcid.org/0000-0003-3544-8836
Yong ZhangCenter for Drug Evaluation and Research, US Food and Drug Administration, Silver Spring, Maryland, United States of America.
Elizabeth HillLymphoid Malignancies Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Frank CrossCenter for Drug Evaluation and Research, US Food and Drug Administration, Silver Spring, Maryland, United States of America.
Reena PhilipOncology Center of Excellence, US Food and Drug Administration, Silver Spring, Maryland, United States of America.
Marc R TheoretCenter for Drug Evaluation and Research, US Food and Drug Administration, Silver Spring, Maryland, United States of America.
Ola LandgrenDivision of Myeloma, Sylvester Comprehensive Cancer Center, University of Miami, Miami, Florida, United States of America.
Andrea C BainesCenter for Drug Evaluation and Research, US Food and Drug Administration, Silver Spring, Maryland, United States of America.ORCID https://orcid.org/0000-0002-9372-415X
Dickran KazandjianDivision of Myeloma, Sylvester Comprehensive Cancer Center, University of Miami, Miami, Florida, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

T-cell receptor (TCR) repertoire diversity has been implicated in the progression and prognosis of multiple myeloma (MM). This study aimed to evaluate the association between T-cell clonality, immune response, and clinical outcomes in patients with plasma cell dyscrasias using next-generation sequencing of the TCR β chain (TCRB). TCRB sequencing was performed on peripheral blood samples from patients with monoclonal gammopathy of undetermined significance (MGUS), smoldering multiple myeloma (SMM), and newly diagnosed multiple myeloma (MM). Healthy individuals served as controls. No significant differences in TCR repertoire diversity were observed between healthy individuals and those with MGUS, SMM or MM after adjusting for age. Furthermore, TCR diversity did not correlate with treatment response in newly diagnosed MM or SMM patients. However, machine learning analysis revealed distinct TCR clusters differentially abundant between healthy individuals and those with plasma cell dyscrasias, exhibiting different amino acid properties. These findings suggest that shared T-cell receptor specificities among patients with plasma cell dyscrasias reflect underlying differences in antigen recognition and underscore the need for further studies to unravel the functional and clinical significance of these distinct immune signatures.

Indexed as

Machine LearningMultiple MyelomaParaproteinemiasReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betaAgedAged, 80 and overCase-Control StudiesFemaleHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedMonoclonal Gammopathy of Undetermined SignificanceReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID41144424
PMCPMC12558469

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.