Evidence map›Paper›PMID 41141634›Full record

ArticleBio-protocol2025

Identification and Sorting of Adipose Inflammatory and Metabolically Activated Macrophages in Diet-Induced Obesity.

Dan Wu, Komal Rawal, Venkateswararao Eeda, Hui-Ying Lim, Weidong Wang

Abstract read
In one paragraph

Article in Bio-protocol, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dan WuDepartment of Genetics, Heersink School of Medicine, UAB Comprehensive Diabetes Center, University of Alabama at Birmingham, 1918 University Blvd, Birmingham, AL, USA.
Komal RawalDepartment of Medicine, Division of Endocrinology, The University of Oklahoma Health Science Center, 941 Stanton L. Young Boulevard, Oklahoma City, OK, USA.
Venkateswararao EedaDepartment of Medicine, Division of Endocrinology, The University of Oklahoma Health Science Center, 941 Stanton L. Young Boulevard, Oklahoma City, OK, USA.
Hui-Ying LimDepartment of Genetics, Heersink School of Medicine, UAB Comprehensive Diabetes Center, University of Alabama at Birmingham, 1918 University Blvd, Birmingham, AL, USA.
Weidong WangDepartment of Genetics, Heersink School of Medicine, UAB Comprehensive Diabetes Center, University of Alabama at Birmingham, 1918 University Blvd, Birmingham, AL, USA.

Funding

Preclinical Validation of PPARg Acetylation Inhibitors for Diabetes Prevention and TreatmentR01DK128848 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI WANG, WEIDONG · 2021 to 2025
$2.4M
Developing proinsulin misfolding inhibitors for beta cell protection and diabetes treatmentR01DK130174 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Weidong Wang · 2022 to 2026
$1.9M
NIDDK NIH HHS R01 DK128848NIDDK NIH HHS R01 DK130174
6 · The paper itself

Abstract

Adipose tissue macrophages (ATMs) critically influence obesity-induced inflammation and metabolic dysfunction. Recent studies identified distinct ATM subsets characterized by markers such as CD11c, CD9, and Trem2, associated with pro-inflammatory and metabolically activated states. This protocol outlines a detailed, reproducible methodology for isolating, characterizing, and sorting these ATM subsets from murine epididymal white adipose tissue (eWAT) using multicolor flow cytometry. Key steps include stromal vascular fraction (SVF) isolation, immunophenotyping, sequential gating strategies, and fluorescence-activated cell sorting (FACS) for downstream gene expression analysis. The protocol was validated in diet-induced obese (DIO) mice treated with the IRE1 RNase inhibitor STF-083010, demonstrating its utility for studying ATMs in the context of obesity and metabolic disease. Key features • Detailed isolation and identification of multiple ATM subsets from eWAT. • Compatible with comprehensive flow cytometric analyses and fluorescence-activated cell sorting (FACS). • Facilitates downstream gene expression profiling from sorted ATM subsets. • Validated using a metabolic intervention (IRE1 RNase inhibitor STF-083010) in a mouse obesity model.

Indexed as

Adipose tissue macrophageseWATFlow cytometryInflammationIRE1 inhibitionMetabolismMouse modelObesitySVF

Identifiers

PMID41141634
PMCPMC12550519

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.