Evidence map›Paper›PMID 41141365›Full record

ArticleMolecular therapy. Oncology2025

Identifying gene expression signatures of oncolytic virus response in patient-derived pancreatic ductal adenocarcinoma organoids.

Marco Huberts, Elham Aida Farshadi, Farzana Mohammad, Jie Ju, Andrew Stubbs, Ron A M Fouchier, Bernadette G van den Hoogen

Abstract read
In one paragraph

Article in Molecular therapy. Oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Marco HubertsViroscience Department, Erasmus Medical Centrum, Rotterdam, the Netherlands.
Elham Aida FarshadiDepartment of Pulmonary Medicine, Erasmus University Medical Center, Rotterdam, the Netherlands.
Farzana MohammadDepartment of Pulmonary Medicine, Erasmus University Medical Center, Rotterdam, the Netherlands.
Jie JuDepartment of Pathology and Clinical Bioinformatics, Erasmus Medical Centrum, Rotterdam, the Netherlands.
Andrew StubbsDepartment of Pathology and Clinical Bioinformatics, Erasmus Medical Centrum, Rotterdam, the Netherlands.
Ron A M FouchierViroscience Department, Erasmus Medical Centrum, Rotterdam, the Netherlands.
Bernadette G van den HoogenViroscience Department, Erasmus Medical Centrum, Rotterdam, the Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pancreatic ductal adenocarcinoma is among the deadliest cancers, with a poor prognosis. Viro-immunotherapy using oncolytic viruses represents a promising treatment. However, pancreatic ductal adenocarcinoma from different patients responds variably to these therapies, highlighting the need for predictive biomarkers. This study aimed to identify gene expression profiles that predict responses to oncolytic viruses. Patient-derived organoids (PDOs) from ten pancreatic ductal adenocarcinoma patients were evaluated for sensitivity to Newcastle disease virus (NDV), reovirus (RV), measles virus, and a gorilla-derived adenovirus. The sensitivity data revealed heterogeneous responses, with nine of ten PDOs being sensitive to at least one virus. The sensitivity of PDOs was correlated with their baseline transcriptome, resulting in gene expression profiles associated with sensitivity to each oncolytic virus. Gene Ontology analysis of the gene expression profiles revealed that intracellular aberrations, particularly those involved in embryonic development, were primary determinants of sensitivity. Additionally, for some oncolytic viruses (OVs), the gene expression profiles linked to sensitivity were associated with genes regulating cell cycle, metabolism, and cell proliferation. Screening tumors for these gene profiles may aid in selecting effective viral treatments for pancreatic ductal adenocarcinoma, providing the stepping stone toward personalized viro-immunotherapy.

Indexed as

biomarkersMT: Regular Issueoncolytic virusespancreatic ductal adenocarcinomapatient-derived organoidspersonalized medicineviro-immunotherapy

Identifiers

PMID41141365
PMCPMC12546772

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.