Evidence map›Paper›PMID 41139156›Full record

ArticleEye (London, England)2025

Metagenomic next-generation sequencing: a game-changer in the diagnosis of unique intraocular infections.

Zohar Habot-Wilner, Michael Ostrovsky, Dinah Zur, Shulamit Schwartz, David Hagin, Avi Gadoth, Ronen Ben-Ami, Yael Paran, Hanoch Goldshmidt, Matan Slutzkin and 2 more

Abstract readCase Reports
In one paragraph

Article in Eye (London, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Zohar Habot-WilnerDivision of Ophthalmology, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel. zwilner@hotmail.com.ORCID http://orcid.org/0000-0002-1058-0286
Michael OstrovskyDepartment of Ophthalmology, Kaplan Medical Center, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem, Israel.ORCID http://orcid.org/0000-0001-7128-3288
Dinah ZurDivision of Ophthalmology, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel.
Shulamit SchwartzDivision of Ophthalmology, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel.
David HaginGray Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv, Israel.
Avi GadothGray Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv, Israel.
Ronen Ben-AmiGray Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv, Israel.
Yael ParanGray Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv, Israel.
Hanoch GoldshmidtDivision of Laboratories, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel.
Matan SlutzkinDivision of Laboratories, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel.
Amos AdlerGray Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv, Israel.
Katya LevytskyiDivision of Laboratories, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo thoroughly describe unique intraocular infections diagnosed by metagenomic next-generation sequencing (mNGS).

methodsA retrospective case series of patients presenting with challenging atypical intraocular infections at Tel Aviv Sourasky Medical Center during 2024. Clinical and demographic data, as well as mNGS results were extracted from patient records. mNGS was performed on the Illumina NextSeq500 platform using a custom bioinformatics pipeline. The following parameters were examined: Reads Per Million, Reads Per Million-ratio to negative control and E-index (K-mers*coverage/reads).

resultsThe study included three patients with novel presentations of intraocular infections, manifesting with atypical clinical manifestations and negative routine diagnostic workups. mNGS allowed the identification of Cytomegalovirus in a 43-year-old male with a history of autosomal dominant hyper-IgE syndrome, Bartonella henselae infection manifesting with photoreceptoritis, retinal vasculitis and global retinal dysfunction in a healthy 28-year-old female, and polymicrobial endophthalmitis with Rothia mucilaginosa and Pantoea agglomerans following intravitreal faricimab injection for neovascular age-related macular degeneration in an 81-year-old male. Treatment regimens were adjusted based on mNGS results.

conclusionsMetagenomic next-generation sequencing has an important role in the diagnosis of challenging intraocular infections. It enables comprehensive pathogen identification and enhances the precision of treatment strategies.

Indexed as

EndophthalmitisEye Infections, BacterialHigh-Throughput Nucleotide SequencingMetagenomicsHumansRetrospective Studies

Identifiers

PMID41139156
PMCPMC12669242

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