Evidence map›Paper›PMID 41136901›Full record

ArticleBMC genomics2025

Genome-wide analysis of terpene synthase family in peanut (Arachis hypogaea L.) explores the potential cross-talk in terpenoid biosynthesis.

Li Chunmei, Ye Fuyang, Jin Han, He Haiyang, Du Zijun, Zhu Jing, Chen Zhenbang, Liu Kai, Wan Xiaorong

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Li ChunmeiGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China.
Ye FuyangGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China.
Jin HanGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China.
He HaiyangGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China.
Du ZijunGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China.
Zhu JingGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China.
Chen ZhenbangGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China.
Liu KaiGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China. liukai5088@126.com.
Wan XiaorongGuangzhou Key Laboratory for Research and Development of Crop Germplasm Resources, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China. bioxrwan@hotmail.com.

Funding

the Basic and Applied Basic Research Foundation of Guangdong Province No. 2024A1515013028the Basic and Applied Basic Research Foundation of Guangdong Province No. 2025A1515012591the Department of Education of Guangdong Province No. 2020ZDZX1013the Department of Science and Technology of Guangdong Province 2023B0202010025the Guangdong Provincial Universities Characteristic Innovation Project No. 2023KTSCX046the Guangzhou Science and Technology Plan Project No. 2024A04J4995the National Natural Science Foundation of China No. 32071737the National Natural Science Foundation of China No. 32402397the open competition program of top ten critical priorities of Agricultural Science and Technology Innovation for the 14th Five-Year Plan of Guangdong Province No. 2022SDZG05the open competition program of top ten critical priorities of Agricultural Science and Technology Innovation for the 14th Five-Year Plan of Guangdong Province No. 2023SDZG05the State Key Laboratory for Managing Biotic and Chemical Treats to the Quality and Safety of Agro-products No. 2021DG700024-KF202408the State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China No. SKL-KF202315
6 · The paper itself

Abstract

backgroundTerpenoids constitute a diverse group of primary and secondary metabolites that are extensively distributed in living organisms and play key roles in growth, development, and environmental adaptation. Terpenoids are derived from two isomeric precursors that are interconverted by isopentenyl-diphosphate delta-isomerase (IDI), in both the plastids and cytoplasm of plants. The plastidial pathway supplies precursors for diterpenoids and carotenoids, whereas the cytoplasmic pathway provides precursors for sesquiterpenoids and triterpenoids. A family of terpene synthases (TPSs) produce most terpenoids such as sesquiterpenes, hemiterpenes, monoterpenes, diterpenes and sesterterpenes, which in allotetraploid peanut (Arachis hypogaea L.) have been relatively underexplored.

resultsIn this study, 77 AhTPS genes were identified in the peanut genome and phylogenetically classified into five subfamilies. These AhTPSs are organized in clusters across chromosomes and exhibit conserved gene structures and motifs within each subfamily. AhTPSs in the TPS-c and -e/f subfamilies, specifically copalyl diphosphate synthase (CPS) and kaurene synthase (KS), were localized to plastids through transient expression in Nicotiana benthamiana leaves. The expression of AhCPS3 was detected a significant increase in response to abscisic acid (ABA) and methyl jasmonate (MeJA), which was notably distinct from the expression patterns of other AhCPSs and AhKS. Furthermore, 12 terpenoids were identified during seed development. Module-trait correlation analysis disclosed that the expression levels of genes encoding AhCPSs (involved in diterpene biosynthesis) and phytoene synthases (AhPSYs, involved in carotenoid biosynthesis) were significantly correlated with the abundances of soyasaponins (triterpenoids) during seed development in peanut. Additionally, the gene encoding β-amyrin synthase (AhβAS), which produces the backbone of triterpenoids, was identified in a significant module and was also induced by ABA and MeJA. Protein-protein interaction networks indicated AhCPSs, AhPSYs, and AhβAS shared a common interacting protein, AhIDI.

conclusionsThese findings provide valuable insights into the potential cross-talk in terpenoid biosynthesis across different cellular compartments.

Indexed as

Alkyl and Aryl TransferasesArachisPlant ProteinsTerpenesAcetatesCyclopentanesGene Expression Regulation, PlantGenome, PlantMultigene FamilyOxylipinsPhylogenyAcetatesAlkyl and Aryl TransferasesCyclopentanesOxylipinsPlant ProteinsTerpenesterpene synthaseGene expressionGene familyPeanutTerpene synthase

Identifiers

PMID41136901
PMCPMC12551260

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.