Evidence map›Paper›PMID 41134773›Full record

ArticlePloS one2025

HPV testing in cervical cancer formalin-fixed paraffin embedded tissues: Reliability of the Xpert HPV test and high-risk HPV genotypes distribution in Tunisia.

Yasmine Ben Taher, Mariem Ben Rekaya, Emna Romdhane, Baligh Miladi, Linda Bel Hadj Kacem, Ahmed Med H'mayada, Nadia Ben Mansour, Farah Sassi, Emna Chelbi, Monia Tangour and 2 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yasmine Ben TaherFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.
Mariem Ben RekayaFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.ORCID https://orcid.org/0000-0001-7176-5201
Emna RomdhaneFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.
Baligh MiladiFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.
Linda Bel Hadj KacemFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.
Ahmed Med H'mayadaFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.
Nadia Ben MansourEpidemiology and Preventive Medicine Department, Charles Nicolle Hospital, Tunis, Tunisia.
Farah SassiFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.
Emna ChelbiPathology Department, Taher Maamouri Hospital, Nabeul, Tunisia.
Monia TangourHistopathology laboratory, Nabeul, Tunisia.
Ahlem BlelFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.
Soumaya RammehFaculty of Medicine of Tunis, LR23ES02, University Tunis El Manar, Tunis, Tunisia.ORCID https://orcid.org/0000-0003-0366-4630

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesThis study aims to assess the performance of the Xpert HPV test for the detection and genotyping of high-risk HPVs (HR-HPV) on FFPE cervical cancer (CC) tissues and to determine the distribution of HR-HPV genotypes in a CC Tunisian series.

methodsThe Xpert HPV test was conducted on purified DNA from 134 FFPE CC tissues. A single-tube multiplex polymerase chain reaction (PCR) served as a comparator assay to evaluate Xpert HPV performance in detecting and genotyping HR-HPVs. Discordant cases were tested using uniplex PCR.

resultsThe Xpert HPV test generated valid results in 131/134 (97.8%) samples. Sensitivity, specificity, positive and negative predictive values of Xpert HPV for HR-HPV detection among valid samples were 99.16%, 100%, 100%, and 92.31%, respectively. Agreement between Xpert HPV and multiplex PCR for HPV detection was observed in 131/134 cases (97.8%), with a kappa value of 0.892. Agreement between Xpert HPV and Multiplex PCR for HR-HPV genotyping was 96.6%. Combining assays results and after confirmation with uniplex PCR, HR-HPVs were detected in 119/134 (88.8%) samples and 11 HR-HPV genotypes were detected with a predominance of HPV 16 (71%), followed by HPV 31 (8%) and HPV 18 (5%).

conclusionThis study demonstrated a high accuracy of the Xpert-HPV test for HR-HPVs detection and genotyping in FFPE CC tissues and revealed a distinct distribution of HR-HPVs in Tunisia.

Indexed as

PapillomaviridaePapillomavirus InfectionsUterine Cervical NeoplasmsAdultAgedDNA, ViralFemaleFormaldehydeGenotypeHumansMiddle AgedMultiplex Polymerase Chain ReactionParaffin EmbeddingReproducibility of ResultsSensitivity and SpecificityTunisiaDNA, ViralFormaldehyde

Identifiers

PMID41134773
PMCPMC12551861

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.