Evidence map›Paper›PMID 41134659›Full record

ArticleJournal of chemical theory and computation2026

Energy-Based Coarse-Graining in Molecular Dynamics: A Flow-Based Framework without Data.

Maximilian Stupp, P S Koutsourelakis

Abstract read
In one paragraph

Article in Journal of chemical theory and computation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Maximilian StuppProfessorship of Data-Driven Materials Modeling, School of Engineering and Design, Technical University of Munich, Garching bei München 85748, Germany.
P S KoutsourelakisProfessorship of Data-Driven Materials Modeling, School of Engineering and Design, Technical University of Munich, Garching bei München 85748, Germany.ORCID 0000-0002-9345-759X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coarse-grained (CG) models provide an effective route to reduce the complexity of molecular simulations, but conventional approaches depend heavily on long, all-atom molecular dynamics trajectories to adequately sample the configurational space. This data dependence limits accuracy and generalizability, as unvisited configurations remain excluded from the resulting CG models. We introduce a fully data-free, generative framework for coarse-graining that directly targets the all-atom Boltzmann distribution. The model defines a structured latent space comprising

Identifiers

PMID41134659
PMCPMC12805520

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.