Evidence map›Paper›PMID 41134609›Full record

ArticleMedical physics2025

A GPU-based Monte Carlo model for water radiolysis under ultra-high dose rate irradiation: Development and validation with MPEXS2.1-DNA.

Shogo Okada, Koichi Murakami, Tamon Kusumoto, Katsuya Amako, Takashi Sasaki

Abstract readValidation Study
In one paragraph

Article in Medical physics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Shogo OkadaComputing Research Center, High Energy Accelerator Research Organization (KEK), Tsukuba, Ibaraki, Japan.
Koichi MurakamiComputing Research Center, High Energy Accelerator Research Organization (KEK), Tsukuba, Ibaraki, Japan.
Tamon KusumotoRadiation Measurement Research Group, National Institutes for Quantum Science and Technology (QST), Inage-ku, Chiba, Japan.
Katsuya AmakoComputing Research Center, High Energy Accelerator Research Organization (KEK), Tsukuba, Ibaraki, Japan.
Takashi SasakiComputing Research Center, High Energy Accelerator Research Organization (KEK), Tsukuba, Ibaraki, Japan.

Funding

JSPS KAKENHI JP21H04881JSPS KAKENHI JP21K12246
6 · The paper itself

Abstract

backgroundFLASH radiotherapy using ultra-high dose rates (UHDR, > 40 Gy/s) demonstrates significant healthy-tissue sparing while maintaining tumor-control effectiveness. However, the underlying mechanisms remain unclear, with hypotheses suggesting that reductions in reactive oxygen species (ROS) yields could contribute to the FLASH effect. Direct experimental measurements of ROS dynamics under UHDR conditions are challenging, making Monte Carlo simulations valuable complementary tools for tracking individual water radiolysis species over time. PURPOSE: To enable a mechanistic investigation of ROS yield reductions under UHDR conditions, we developed a GPU-based water radiolysis simulation platform capable of modeling key radiation chemistry processes.

methodsUsing our MPEXS2.1-DNA framework with step-by-step molecular tracking, we simulated sequential 55 MeV proton irradiation in a 1 × 1 × 1 µm

resultsThe calculated dose rate dependence of the G values of hydroxyl radicals showed agreement with experimental data, with relative G values decreasing monotonically from 1.0 at 0.02 Gy/s to approximately 0.12 at 500 Gy/s at 10 ms post-irradiation. Our simulations revealed that intertrack chemical reactions between neighboring proton tracks occurred, leading to decreases in the G values of hydroxyl radicals through enhanced radical-radical interactions. The G values of hydrated electrons remained constant (G ≈ 2.5 species/100 eV) across all dose rates under deoxygenated conditions, consistent with experimental observations. Oxygen consumption followed a depletion rate of 0.028%/Gy (0.27 µM/Gy), in agreement with experimental measurements, but was insufficient to cause significant depletion at typical UHDR doses (10-40 Gy). Additionally, the calculated G values of hydrogen peroxide increased by 20% with dose rate (contrary to measured decreases of 20%-40%), suggesting the presence of competitive reaction pathways not included in current models.

conclusionsWe developed a GPU-based computational framework for water radiolysis simulations under UHDR conditions using MPEXS2.1-DNA. Our step-by-step approach enabled spatially precise tracking of intertrack reactions among radiolysis species originating from different proton tracks, a capability not achievable with conventional simplified methods. Additionally, we demonstrated that large-scale statistical analysis is computationally feasible under UHDR conditions through GPU acceleration. Our results successfully reproduced the experimental trends for the G values of hydroxyl radicals and hydrated electrons. Oxygen depletion rates also showed good agreement with experimental measurements. However, the discrepancy between simulated and measured G values of hydrogen peroxide indicates the need to incorporate additional competitive reactions, potentially including third-order mechanisms, for future UHDR modeling studies.

Indexed as

Computer GraphicsDNAMonte Carlo MethodRadiation DosageWaterReactive Oxygen SpeciesDNAReactive Oxygen SpeciesWaterCUDAGPGPUMonte Carlo simulationultra‐high dose rate irradiationwater radiolysis simulations

Identifiers

PMID41134609
PMCPMC12551771

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