ArticleFrontiers in plant science2025
PacBio single-molecule long-read transcriptome sequencing and analysis of somatic embryogenesis in
Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Introduction: Methods: We performed long-read transcriptome sequencing of pooled samples from various somatic embryogenesis stages using PacBio SMRT technology. The obtained transcripts were functionally annotated using the Nr, SwissProt, KEGG, and KOG databases. We conducted comprehensive transcript structure analyses, including identification of alternative splicing, SSR loci, lncRNAs, and transcription factors. Furthermore, we cloned the Results: Our analysis generated 12,232 high-quality transcripts. We identified 83 genes with alternative splicing, 1,006 SSR loci, 35 lncRNAs, and 548 transcription factors from 46 distinct families. The Discussion: This study establishes the first reference-quality transcriptome database for
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.