Article in Journal of integrative plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
2 · The registry
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
5 · Who and what money
Authors and funding
16 authors.
Zixin ZhangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0000-0002-1135-6606
Jing ZhangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0009-0003-8918-3981
Yi WangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0009-0007-4976-5150
Yuting ChenKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0009-0006-2408-3981
Xin ZhangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0009-0003-3264-5903
Wen LiKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0009-0000-8433-3141
Yiren XiaoNational Key Laboratory of Plant Molecular Genetics, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Shanghai, 200032, China.ORCID https://orcid.org/0000-0002-5252-328X
Ke ZhouBeijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops College of Horticulture, China Agricultural University, Beijing, 100193, China.ORCID https://orcid.org/0000-0001-5918-3735
Yanling LaiKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0009-0005-1868-0061
Dan SuKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0000-0002-6783-3758
Evangelos TatsisNational Key Laboratory of Plant Molecular Genetics, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Shanghai, 200032, China.ORCID https://orcid.org/0000-0002-4013-1537
Mingchun LiuKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0000-0001-8004-1758
Zhenhui ZhongKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0000-0002-8438-0375
Yang ZhangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Chengdu Botanical Garden-Sichuan University Joint Laboratory for Ex Situ Conservation and Resource Utilization of Mountain Plants, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID https://orcid.org/0000-0002-7793-1108
Funding
National Natural Science Foundation of China 32200260the Chengdu agricultural science and technology talent cultivation project 2023-CD-NYKJYC-1the Fundamental Research Funds for the Central Universities SCU2025D0003the Institutional Research Fund of Sichuan University 2020SCUNL106the National Key Research and Development Program of China 2022YFF1001900the Sichuan Science and Technology Program 2024NSFSC0036
6 · The paper itself
Abstract
Modifying the light formula is a central strategy for improving the yield and quality of fruits and vegetables in agriculture. While light signals have long been acknowledged as primary factors in regulating plant growth and development, their role in reprogramming metabolic networks is not well understood. Using tomato as a model, we demonstrate that supplementation with red or blue light induces metabolic shifts in tomato fruit. Through the creation of the Tomato Light-induced Expression Database (TomLED), we identified extensive transcriptomic and metabolic changes in tomato fruit under varying light conditions. Notably, the induction of key master regulators and metabolic genes is mediated by increased genome-wide DNA demethylation, facilitated by SlDML2. Additionally, we show that SlHY5, a central regulator in the light signaling pathway, directly induces the expression of SlDML2. This study reveals the molecular mechanisms by which light regulates the plant epigenome and establishes a direct link between light signals and plant metabolism.
Indexed as
DNA DemethylationDNA MethylationFruitLightMetabolomePlant ProteinsSolanum lycopersicumGene Expression Regulation, PlantPlant ProteinsDNA demethylationlight signalingSlDML2SlHY5tomato fruit
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.
Light regulates tomato fruit metabolome via SlDML2-mediated global DNA demethylation. · full record | OpenQuestion