Evidence map›Paper›PMID 41131669›Full record

ArticlePlant physiology2025

Diverse triggers, common outcome: Senescence in Fix⁻ Medicago truncatula nodules.

Alexandra Pál, Rui M Lima, Hilda Tiricz, Ferhan Ayaydin, Attila Kereszt, Éva Kondorosi, Edit Ábrahám

Abstract read
In one paragraph

Article in Plant physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alexandra PálMicrobial and Plant Genomics Research Unit, Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged H-6726, Hungary.ORCID 0000-0002-5712-1984
Rui M LimaMicrobial and Plant Genomics Research Unit, Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged H-6726, Hungary.ORCID 0000-0002-8193-7721
Hilda TiriczMicrobial and Plant Genomics Research Unit, Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged H-6726, Hungary.ORCID 0009-0004-9596-5514
Ferhan AyaydinAgribiotechnology and Precision Breeding for Food Security National Laboratory, Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged H-6726, Hungary.ORCID 0000-0002-9126-0865
Attila KeresztMicrobial and Plant Genomics Research Unit, Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged H-6726, Hungary.ORCID 0000-0002-4421-6554
Éva KondorosiMicrobial and Plant Genomics Research Unit, Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged H-6726, Hungary.ORCID 0000-0002-4065-8515
Edit ÁbrahámSynthetic and Systems Biology Unit, Institute of Biochemistry, HUN-REN Biological Research Centre, Szeged H-6726, Hungary.ORCID 0000-0002-1268-760X

Funding

Balzan Prize 2018Chemical EcologyFrontline Research KKP129924Hungarian National Research, Development and Innovation OfficeInternational Balzan FoundationThe Hungarian National Research, Development and Innovation Office K 134841The Hungarian National Research, Development and Innovation Office K 146663The Hungarian National Research, Development and Innovation Office STARTING_151207
6 · The paper itself

Abstract

Nodule senescence in barrel medic (Medicago truncatula) can occur as a natural, developmentally regulated process or be triggered prematurely by environmental stress or ineffective symbiotic interactions. In this study, we examined five M. truncatula Fix⁻ mutants (dnf4, dnf7-2, TR183, TRV36, and TR36) that fail to fix nitrogen to determine whether they share common senescence-related traits. Our findings reveal that, despite distinct genetic defects, all mutants exhibit similar hallmarks of premature senescence: a rapid decline in the transcription of nitrogen-fixation-related genes (as indicated by DINITROGENASE REDUCTASE (NifH) expression), early degradation of bacteroids and symbiotic cells, recolonization of nodules by saprophytic rhizobia, premature closure of the nodule endodermis, impaired postmitotic differentiation of the symbiotic cells, and upregulation of senescence marker genes (CYSTEINE PROTEASE 2 (CP2), CYSTEINE PROTEASE 6 (CP6), CHITINASE 2, and PURPLE ACID PHOSPHATASE 22 (PAP22). Neither symbiotic maintenance genes (DEFECTIVE IN NITROGEN FIXATION 2 (DNF2), Symbiotic CYSTEINE-RICH RECEPTOR-LIKE KINASE (SymCRK), and REGULATOR OF SYMBIOSOME DIFFERENTIATION (RSD)) that inhibit plant defense responses nor the defense-related gene PATHOGENESIS-RELATED PROTEIN 10.1 (PR10.1) were upregulated, suggesting that premature senescence in these mutants is driven primarily by proteolytic activities rather than immune responses. These results indicate that early nodule senescence is a common feature of ineffective M. truncatula-Sinorhizobium medicae interactions, independent of the specific genetic mutation. Understanding nodule longevity and functionality may contribute to the development of strategies to enhance symbiotic efficiency in legumes for sustainable agriculture.

Indexed as

Medicago truncatulaPlant SenescenceRoot Nodules, PlantAcid PhosphataseChitinasesCysteine EndopeptidasesCysteine ProteasesGene Expression Regulation, PlantGenes, PlantMutationNitrogen FixationPlant ProteinsSymbiosisAcid PhosphataseChitinasesCysteine EndopeptidasesCysteine ProteasesPlant Proteinspurple acid phosphatase

Identifiers

PMID41131669
PMCPMC12610396

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.