Evidence map›Paper›PMID 41126326›Full record

ArticleGenome biology2025

iNOME-seq: in vivo simultaneous genome-wide mapping of chromatin accessibility, nucleosome positioning, DNA-binding protein sites, and DNA methylation in Arabidopsis.

Nosheen Hussain, Ryan Merritt, Julia Engelhorn, Javier Antunez-Sanchez, Anjar Wibowo, David Latrasse, Travis Wrightsman, Maximillian Collenberg, Ilja Bezrukov, Hidayah Alotaibi and 5 more

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Article in Genome biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Nosheen HussainSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Ryan MerrittSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Julia EngelhornSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Javier Antunez-SanchezSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Anjar WibowoDepartment of Molecular Biology, Max Planck Institute for Biology Tübingen, Tübingen, 72076, Germany.
David LatrasseInstitute of Plant Sciences, Université Paris-Saclay, CNRS, INRAE, University Evry, Paris-Saclay (IPS2), Orsay, 91405, France.
Travis WrightsmanDepartment of Molecular Biology, Max Planck Institute for Biology Tübingen, Tübingen, 72076, Germany.
Maximillian CollenbergDepartment of Molecular Biology, Max Planck Institute for Biology Tübingen, Tübingen, 72076, Germany.
Ilja BezrukovDepartment of Molecular Biology, Max Planck Institute for Biology Tübingen, Tübingen, 72076, Germany.
Hidayah AlotaibiDepartment of Biology, College of Science, Princess Nourah bint Abdulrahman University, Riyadh, 11671, Saudi Arabia.
Elsa CarrascoSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Moussa BenhamedInstitute of Plant Sciences, Université Paris-Saclay, CNRS, INRAE, University Evry, Paris-Saclay (IPS2), Orsay, 91405, France.
Detlef WeigelDepartment of Molecular Biology, Max Planck Institute for Biology Tübingen, Tübingen, 72076, Germany.
Nicolae Radu ZabetSchool of Life Sciences, University of Essex, Colchester, CO4 3SQ, UK. r.zabet@qmul.ac.uk.
Jose Gutierrez-MarcosSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK. j.f.gutierrez-marcos@warwick.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present iNOMe-seq, a novel method for in vivo simultaneous profiling of chromatin accessibility, nucleosome occupancy, DNA-binding protein sites, and DNA methylation in living tissues. iNOMe-seq utilizes an

Indexed as

ArabidopsisChromatinDNA-Binding ProteinsDNA MethylationNucleosomesArabidopsis ProteinsBinding SitesChromosome MappingGenome, PlantSequence Analysis, DNATranscription FactorsArabidopsis ProteinsChromatinDNA-Binding ProteinsNucleosomesTranscription FactorsArabidopsisChromatinMetabolic gene clusterNucleosomeTranscription

Identifiers

PMID41126326
PMCPMC12542186

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.