Evidence map›Paper›PMID 41123165›Full record

ArticleGenome biology and evolution2025

The Genome Sequence of the Hemlock Woolly Adelgid, Adelges tsugae Annand 1924.

Bryan M T Brunet, Dustin T Dial, Gaelen R Burke, Carol D von Dohlen, Julia Douglas Freitas, Haley Sanderson, Afiya R Chida, Samantha J Jones, Fergal J Martin, Leanne Haggerty and 5 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome biology and evolution, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Bryan M T BrunetOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada K1A 0C6.ORCID 0000-0001-5083-9662
Dustin T DialDepartment of Entomology, University of Georgia, Athens, GA 30602, USA.ORCID 0000-0002-3141-5837
Gaelen R BurkeDepartment of Entomology, University of Georgia, Athens, GA 30602, USA.ORCID 0000-0003-3472-0420
Carol D von DohlenDepartment of Biology, Utah State University, Logan, UT 84322-0300, USA.ORCID 0000-0002-3961-251X
Julia Douglas FreitasOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada K1A 0C6.ORCID 0009-0004-9287-2929
Haley SandersonOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada K1A 0C6.ORCID 0009-0006-4812-1647
Afiya R ChidaCanada's Michael Smith Genome Sciences Centre, Vancouver, BC, Canada V5Z 4S6.ORCID 0000-0002-0053-7735
Samantha J JonesCanada's Michael Smith Genome Sciences Centre, Vancouver, BC, Canada V5Z 4S6.ORCID 0000-0001-9475-3609
Fergal J MartinEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Cambridge CB10 1SD, UK.ORCID 0000-0002-1672-050X
Leanne HaggertyEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Cambridge CB10 1SD, UK.ORCID 0000-0001-8843-3596
Stephen W SchererThe Centre for Applied Genomics, The Hospital for Sick Children, Toronto, ON, Canada M5G 0A4.ORCID 0000-0002-8326-1999
Ioannis RagoussisMcGill Genome Centre, Victor Phillip Dahdaleh Institute of Genomic Medicine, McGill University, Montreal, QC, Canada H3A 0G1.ORCID 0000-0002-8515-0934
Steven J M JonesCanada's Michael Smith Genome Sciences Centre, Vancouver, BC, Canada V5Z 4S6.ORCID 0000-0003-3394-2208
Robert G FoottitOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada K1A 0C6.ORCID 0000-0001-6957-2072
Nathan P HavillUSDA Forest Service, Northern Research Station, Hamden, CT 06514, USA.ORCID 0000-0002-4004-8266

Funding

Agriculture and Agri-Food Canada J-002279Biotechnology and Biological Sciences Research Council BB/T015608/1Biotechnology and Biological Sciences Research Council BB/W019108/1Biotechnology and Biological Sciences Research Council BB/X018695/1EMBL transversal researchEuropean Molecular Biology LaboratoryEuropean Research Executive AgencyEuropean UnionGenome Canada 18107National Science Foundation DEB-1655177National Science Foundation DEB-1655182UK Medical Research Council MR/S000453/1United States Department of Agriculture Forest Service Northern Research StationUtah Agricultural Experiment StationUtah State University 9852Wellcome Trust 222155/Z/20/ZWellcome Trust 226083/Z/22/ZWellcome Trust 226458/Z/22/Z
6 · The paper itself

Abstract

The genome of the hemlock woolly adelgid (Adelges tsugae) is presented in 10 chromosomal pseudomolecules along with 132 unplaced scaffolds for a combined length of 216.56 Mb. The genome is highly contiguous with an N50 of 20.54 Mb and its longest scaffold 37.41 Mb in length. The assembly recovered 97.7% of benchmarked universal single-copy Hemiptera orthologs (BUSCO) with an overall completion score of 98.6%. On the basis of chromosomal synteny with other aphid genomes, the hemlock woolly adelgid's genome is composed of eight autosomes and two sex (X) chromosomes. Annotation of the assembly identified 11,800 coding genes, 1,930 noncoding genes, and 20,403 mRNA transcripts. The mitogenome is also presented in a single, annotated, circular contig 25,980 bases in length.

Indexed as

Genome, InsectAnimalsGenome, MitochondrialMolecular Sequence AnnotationSyntenyAdelges tsugaeAdelgidaechromosome-scalegenome assemblymitogenome

Identifiers

PMID41123165
PMCPMC12541381

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.