Evidence map›Paper›PMID 41120828›Full record

ArticleBMC microbiology2025

Phage vB_KpnM_JYSS3 encodes a novel polysaccharide depolymerase that exhibits specific activity against K2-type carbapenem-resistant Klebsiella pneumoniae.

Shi-Yan Jiao, Xia Wang, Jie Wang, Ying-Ying Liu, Lu Zhang, Xiao-Cui Peng, Jia-Le Song, Chun-Miao Wang, Wei Zhang, Xiao-Jun Li

Abstract read
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Phage and endolysin-based inhibition ofFrontiers in cellular and infection microbiology · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Shi-Yan Jiao *College of Lab Medicine, Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China.
Xia Wang *College of Lab Medicine, Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China.
Jie WangCollege of Lab Medicine, Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China.
Ying-Ying LiuBingtuan Xingxin Vocational and Technical College, Tiemenguan, Xinjiang Uygur Autonomous Region, 841007, People's Republic of China.
Lu ZhangCollege of Lab Medicine, Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China.
Xiao-Cui PengCentral Laboratory, the First Affiliated Hospital of Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China.
Jia-Le SongCollege of Lab Medicine, Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China.
Chun-Miao WangCollege of Lab Medicine, Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China.
Wei ZhangCentral Laboratory, the First Affiliated Hospital of Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China. 15369318318@163.com.
Xiao-Jun LiCollege of Lab Medicine, Hebei North University, Zhangjiakou, Hebei Province, 075000, People's Republic of China. xiaojunwsw@sina.com.

Funding

Cultivation Scientific Research Projects of Hebei North University XJPY2024018Medical Science Research Project of Hebei ZF2025274
6 · The paper itself

Abstract

backgroundCarbapenem-resistant Klebsiella pneumoniae (CRKP), a major nosocomial pathogen, poses an increasingly serious threat to human health.

resultsIn the quest for innovative therapeutic modalities to treat CRKP infections, a newly discovered phage, vB_KpnM_JYSS3, which can specifically infect and lyse K2-type CRKP, was isolated and subjected to an array of comprehensive characterizations and genome sequencing. Furthermore, an analysis of the expression of the tail protein (ORF17) and the detection of its functions were carried out. Double-layer agar plates containing CRKP were used to isolate phages from hospital sewage samples. The phage's optimal multiplicity of infection (MOI), lytic spectrum, bactericidal activity, stability, and one-step growth curve were tested. The biofilm development ability of the CRKP strain 21AA2216 and the phage antibiofilm activity were determined using a 96-well microtitration plate. vB_KpnM_JYSS3 prevented biofilm generation and broke down mature biofilms. The whole-genome sequencing results revealed that vB_KpnM_JYSS3 is a toxic phage (nontemperate). The genome size of vB_KpnM_JYSS3 is 47,244 bp, and the G + C content is 48.48 mol%. A total of 71 coding sequences (CDSs) were predicted. Protein function prediction revealed that the tail protein (ORF17) of vB_KpnM_JYSS3 may possess depolymerase activity, consistent with the halo phenomenon around the plaque. ORF17 was expressed, purified, and named Dep17. Dep17 can degrade the capsular polysaccharide (CPS) surrounding K2-type CRKP, and it can also enhance the activity of polymyxin B against K2-type CRKP biofilms.

conclusionsPhage vB_KpnM_JYSS3 and its novel depolymerase Dep17 may represent promising strategies for combating infections resulting from biofilm-forming and drug-resistant K2-type CRKP.

Indexed as

BacteriophagesCarbapenem-Resistant EnterobacteriaceaeGlycoside HydrolasesKlebsiella pneumoniaeViral ProteinsAnti-Bacterial AgentsBiofilmsCarbapenemsGenome, ViralHumansKlebsiella InfectionsSewageWhole Genome SequencingAnti-Bacterial AgentsCarbapenemsGlycoside HydrolasesSewageViral ProteinsBacteriophageBiofilmCarbapenem-resistant Klebsiella pneumoniae (CRKP)Depolymerase

Identifiers

PMID41120828
PMCPMC12542494

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.