Evidence map›Paper›PMID 41118367›Full record

ArticlePLoS pathogens2025

Human monoclonal antibodies to HPV16 show evidence for common developmental pathways and public epitopes.

Joseph J Carter, Nicholas K Hurlburt, Erin M Scherer, Suruchi Singh, Justas V Rodarte, Robin A Smith, Peter Lewis, Rachel Kinzelman, Jacqueline Kieltyka, Madelyn E Cabãn and 3 more

Abstract read
In one paragraph

Article in PLoS pathogens, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Joseph J CarterFred Hutchinson Cancer Center, Seattle, Washington, United States of America.ORCID 0000-0001-6825-1453
Nicholas K HurlburtFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Erin M SchererFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Suruchi SinghFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Justas V RodarteFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Robin A SmithFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Peter LewisFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Rachel KinzelmanFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Jacqueline KieltykaFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Madelyn E CabãnFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Gregory C WipfFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Marie PanceraFred Hutchinson Cancer Center, Seattle, Washington, United States of America.
Denise A GallowayFred Hutchinson Cancer Center, Seattle, Washington, United States of America.ORCID 0000-0002-6713-6127

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Pacific Northwest Center for Cryo-EM: Equipment SupplementR24GM154185 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI James E Evans, CLAUDIA SUSANA LOPEZ · 2024 to 2026
$21.5M
Human Papillomavirus and Polyomavirus Associated Malignancies.R35CA209979 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GALLOWAY, DENISE A. · 2017 to 2023
$6.5M
HPV CAPSID ANTIBODIESR01AI038382 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GALLOWAY, DENISE A. · 1995 to 2020
$4.4M
Acquisition of a Rigaku XtaLAB Synergy-R macromolecular diffraction instrumentation at Fred Hutchinson Cancer Research CenterS10OD028581 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STODDARD, BARRY L. · 2020 to 2020
$600k
NCI NIH HHS P30 CA015704NCI NIH HHS R35 CA209979NIAID NIH HHS R01 AI038382NIGMS NIH HHS R24 GM154185NIH HHS S10 OD028581
6 · The paper itself

Abstract

Antibodies to human papillomavirus (HPV) primarily recognize surface exposed residues on five loops of the major capsid protein (L1) that vary significantly among HPV types. We determined which loops were required for neutralization for 68 HPV16 specific human monoclonal antibodies (mAbs) cloned from participants who received an HPV vaccine and describe molecular features of those antibodies. Chimeric HPV16 pseudovirus (cpsV), each having one surface loop bearing multiple amino acid substitutions, were used to determine neutralization specificity. The HPV16-FG-loop was the loop most frequently required for neutralization (42 of 68, 61.8%), however, all surface loops were required for neutralization by multiple mAbs: HI (13, 19.1%), DE (15, 22.1%), EF (five, 7.4%), BC (four, 5.9%). Antibodies that required multiple loops were common (17, 25.0%). Three mAbs (4.4%) required sequences on the c-terminus of L1 and for another three mAbs the neutralization specificity could not be determined. Two types of mAbs appeared to be overrepresented: ten mAbs used immunoglobin heavy chain variable region 2-70 (IGHV2-70) with immunoglobin light chain variable region 1-40 (IGLV1-40), having characteristic mutations in complementarity determining region two (CDRL2) of the light chain. Cryogenic electron microscopy (Cryo-EM) revealed that two of these antibodies bound five Fabs per capsomer interacting with all five L1-surface loops. The other type of mAbs that appeared to be overrepresented were nine mAbs using IGHV4-34, six of which also used DH3-16*02 with conserved CDRH3 sequences. Cryo-EM for one of these mAbs, that required the FG-loop for neutralization, was shown to bind one Fab per capsomer at the apex, interacting with the DE- and FG-loops, with sequences of the Fab CDRH3 inserted between the DE- and FG-loops from two L1 proteins. These two types of mAbs were found in the four participants suggesting that these antibodies shared developmental pathways and bound to similar immunodominant epitopes on the virus.

Indexed as

Antibodies, MonoclonalAntibodies, ViralEpitopesHuman papillomavirus 16Papillomavirus InfectionsAntibodies, NeutralizingCapsid ProteinsHumansOncogene Proteins, ViralPapillomavirus VaccinesAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralCapsid ProteinsEpitopesOncogene Proteins, ViralPapillomavirus Vaccines

Identifiers

PMID41118367
PMCPMC12551957

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.